ggKbase home page

13_1_20cm_2_scaffold_5972

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5972_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..852
DNA (852bp) protein (284aa)
Mg chelatase, subunit ChlI n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIV2_RHOM4
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Mg chelatase subunit ChlI
13_1_20cm_2_scaffold_5972_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

894..1430
DNA (537bp) protein (179aa)
Isochorismatase hydrolase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WRJ3_GEOS8
isochorismatase hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hydrolase
13_1_20cm_2_scaffold_5972_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1467..1610
DNA (144bp) protein (48aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
13_1_20cm_2_scaffold_5972_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1611..2195)
DNA (585bp) protein (195aa)
Lytic transglycosylase, catalytic n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJU5_9BACT
Lytic transglycosylase, catalytic Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Lytic transglycosylase, catalytic
13_1_20cm_2_scaffold_5972_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2347..4740)
DNA (2394bp) protein (798aa)
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53)
Lon protease n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUI9_9BACT
13_1_20cm_2_scaffold_5972_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4768..5154)
DNA (387bp) protein (129aa)
Transcriptional regulator n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QSG0_PERMH
transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional regulator
13_1_20cm_2_scaffold_5972_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5151..6038)
DNA (888bp) protein (296aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHI0_CHLTF
Zn finger domain-containing DnaJ-class molecular chaperone; K03686 molecular chaperone DnaJ Tax=GWA2_Rokubacteria_73_35_curated
Zn finger domain-containing DnaJ-class molecular chaperone
13_1_20cm_2_scaffold_5972_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6045..6563)
DNA (519bp) protein (173aa)
Chaperone protein DnaK n=2 Tax=Geobacter metallireducens RepID=DNAK_GEOMG
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
dnaK; molecular chaperone DnaK
13_1_20cm_2_scaffold_5972_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6560..7897)
DNA (1338bp) protein (446aa)
Chaperone protein DnaK n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML02_9BACT
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
13_1_20cm_2_scaffold_5972_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7970..8293)
DNA (324bp) protein (108aa)
Heat shock protein Hsp20 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Heat shock protein Hsp20 alias=gwe2_scaffold_8_78 id=2166333 tax=TA06 species=Flexistipes sinusarabici DSM 4947 genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres
Heat shock protein Hsp20
13_1_20cm_2_scaffold_5972_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8677..9201
DNA (525bp) protein (175aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_5972_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9158..9574)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037D3B34
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_5972_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9637..10446
DNA (810bp) protein (270aa)
Protein mazG n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJU2_9BACT
protein mazG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
protein mazG
13_1_20cm_2_scaffold_5972_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10443..10979
DNA (537bp) protein (179aa)
Predicted phosphatase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D049_PELTS
phosphatase Tax=GWA2_Rokubacteria_73_35_curated
phosphatase
13_1_20cm_2_scaffold_5972_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10986..12728
DNA (1743bp) protein (581aa)
Type IV-A pilus assembly ATPase PilB n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPT3_GEOS8
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type IV-A pilus assembly ATPase PilB
13_1_20cm_2_scaffold_5972_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12760..13881
DNA (1122bp) protein (374aa)
Twitching motility protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H835_ANADF
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
twitching motility protein
13_1_20cm_2_scaffold_5972_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14391..15047
DNA (657bp) protein (219aa)
Type II secretion system F domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPT1_GEOS8
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type II secretion system F domain-containing protein
13_1_20cm_2_scaffold_5972_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15047..16669
DNA (1623bp) protein (541aa)
multi-sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Signal transduction histidine-protein kinase atoS n=1 Tax=sediment metagenome RepID=D9PFH4_9ZZZZ
Multi-sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_5972_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16662..18044
DNA (1383bp) protein (461aa)
Transcriptional regulatory protein pilR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD7_9BACT
pilR; transcriptional regulatory protein pilR; K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pilR; transcriptional regulatory protein pilR
13_1_20cm_2_scaffold_5972_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18289..18705
DNA (417bp) protein (139aa)
Putative Fimbrial protein pilin n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF8_9BACT
Fimbrial protein pilin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fimbrial protein pilin
13_1_20cm_2_scaffold_5972_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18968..20869
DNA (1902bp) protein (634aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A2A23
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_5972_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20874..21671
DNA (798bp) protein (266aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AMP0_PELPD
prepilin peptidase
13_1_20cm_2_scaffold_5972_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21644..22108
DNA (465bp) protein (155aa)
Putative type 4 fimbrial pilin related transmembrane protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_5972_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

22105..22542
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_5972_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22496..23053
DNA (558bp) protein (186aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_5972_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

23221..24270
DNA (1050bp) protein (350aa)
Type IV pilus assembly protein PilM n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INN4_ANADE
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=GWA2_Rokubacteria_73_35_curated
type IV pilus assembly protein PilM
13_1_20cm_2_scaffold_5972_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

24267..24830
DNA (564bp) protein (188aa)
Fimbrial assembly family protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E9T1_GEOLS
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
fimbrial assembly family protein
13_1_20cm_2_scaffold_5972_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

24832..25431
DNA (600bp) protein (200aa)
Pilus assembly protein PilO n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Y9_DESAT
pilus assembly protein PilO; K02664 type IV pilus assembly protein PilO Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Pilus assembly protein PilO
13_1_20cm_2_scaffold_5972_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25443..25898
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
alias=gwe2_scaffold_243_65 id=1909131 tax=TA06
13_1_20cm_2_scaffold_5972_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25923..28061
DNA (2139bp) protein (713aa)
Putative Type IV pilus biogenesis secretin PilQ n=1 Tax=mine drainage metagenome RepID=E6PVG3_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type IV pilus secretin PilQ
Displaying items 1-30 of 31 in total

View Taxonomy