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13_1_20cm_2_scaffold_1375_6

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 4823..5347

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGP0_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 178.0
  • Bit_score: 153
  • Evalue 1.50e-34
sigW1; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Rokubacteria_70_16_curated UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 175.0
  • Bit_score: 257
  • Evalue 1.10e-65
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 180.0
  • Bit_score: 154
  • Evalue 3.40e-35

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Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 525
GTGGACCGGCTCCGGCGGGGCGACGCGCGGGCCTTCGACGAGCTCGTGACCGCGTACCAGCACCGGGTCTTCTCGGTGGCCCTCAGGATGCTGCGCAACCGGACCGAGGCGGAGGAGGTCGCGCAGGAGGTGTTCCTACGAGTGTACCGGACCGTCGCCGCGTTCCGGGGCGACGCGAAGCTCTCGACCTGGCTCTACGCGATCGCGTCGCGTCTGTGTCTCAATCGCCTGGCGTCAAGCGACCGGCGGGTGACGCGGGAGGGCGACGAGACGCTGACGCGCCTCGCGAGCGGCGACGCCACCCCTGTCGACGAGCTGGAGCGAAGCGAGCTGGAGGCGACGCTGCACCGCGCGATCGCCGAGCTCCCAGAGGAGCGGCGGATCGTGGTCGTGCTCCGTGACCTCGAGGGCCTCTCGTACGAGGAGATCGCGGCGGCGCTCGACCTGGAGCTCGGCACGGTGAGGTCGAGACTCCACCGCGCCCGGATGGACCTCAAGGAGAAGCTGGAGCGGTTCCTGCCATGA
PROTEIN sequence
Length: 175
VDRLRRGDARAFDELVTAYQHRVFSVALRMLRNRTEAEEVAQEVFLRVYRTVAAFRGDAKLSTWLYAIASRLCLNRLASSDRRVTREGDETLTRLASGDATPVDELERSELEATLHRAIAELPEERRIVVVLRDLEGLSYEEIAAALDLELGTVRSRLHRARMDLKEKLERFLP*