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13_1_20cm_2_scaffold_1375

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1375_1

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1..1431
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003634B47 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM90318.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
amidase
13_1_20cm_2_scaffold_1375_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1438..2964)
DNA (1527bp) protein (509aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J2L262_9RHIZ
oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
oligopeptide ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_1375_3
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3015..3974
DNA (960bp) protein (320aa)
immunogenic protein precursor n=1 Tax=Bradyrhizobium japonicum RepID=UPI000375C4A1
Immunogenic protein {ECO:0000313|EMBL:EJZ30760.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CC
immunogenic protein precursor
13_1_20cm_2_scaffold_1375_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4033..4380)
DNA (348bp) protein (116aa)
UPF0060 membrane protein Csp_C23950 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCG6_9BURK
hypothetical protein; K09771 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
13_1_20cm_2_scaffold_1375_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4377..4646)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000346167F
Hypothetical conserved protein {ECO:0000313|EMBL:ABC93904.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
hypothetical protein
13_1_20cm_2_scaffold_1375_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4823..5347
DNA (525bp) protein (175aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGP0_HALO1
sigW1; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Rokubacteria_70_16_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_2_scaffold_1375_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5344..6291
DNA (948bp) protein (316aa)
Putative anti-sigma-W factor RsiW n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y3T8_ANEAE
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_20cm_2_scaffold_1375_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6444..7859
DNA (1416bp) protein (472aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39ZD7_GEOMG
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_1375_9
unknown

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7907..8428
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_20cm_2_scaffold_1375_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(8449..8973)
DNA (525bp) protein (175aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_1375_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(8970..11153)
DNA (2184bp) protein (728aa)
Cell division protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ67_SYNAS rbh
cell division protein FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cell division protein
13_1_20cm_2_scaffold_1375_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(11153..12823)
DNA (1671bp) protein (557aa)
metallo-beta-lactamase superfamily hydrolase; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ribonuclease J n=1 Tax=Desulfurispora thermophila RepID=UPI00035FFE13
RNA-metabolising metallo-beta-lactamase
13_1_20cm_2_scaffold_1375_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(12914..14164)
DNA (1251bp) protein (417aa)
Peptidase M23 n=1 Tax=Spiribacter salinus M19-40 RepID=R4VQ89_9GAMM
putative peptidase M23 family protein Tax=GWA2_Rokubacteria_73_35_curated
peptidase M23
13_1_20cm_2_scaffold_1375_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(14161..14946)
DNA (786bp) protein (262aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L3R7_FRAAD
dimethyladenosine transferase
13_1_20cm_2_scaffold_1375_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(14933..15571)
DNA (639bp) protein (213aa)
dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Dephospho-CoA kinase n=2 Tax=Geobacter metallireducens RepID=COAE_GEOMG
dephospho-coenzyme A kinase
13_1_20cm_2_scaffold_1375_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(15568..16407)
DNA (840bp) protein (280aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DA6_SOLUE
Displaying 16 items

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