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13_1_20cm_2_scaffold_2216

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2216_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1..171
DNA (171bp) protein (57aa)
hypothetical protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_2216_2
unknown

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243..860
DNA (618bp) protein (206aa)

This feature has no annotations

13_1_20cm_2_scaffold_2216_3
unknown

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comp(876..1181)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_2_scaffold_2216_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1178..1954)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM50_THEM7
hypothetical protein; K07090 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_2216_5
R_NC10_66_22, NC10, Bacteria

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1972..3006
DNA (1035bp) protein (345aa)
Probable serine/threonine-protein kinase pknK n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MBT9_9NOCA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Kelch repeat-containing protein
13_1_20cm_2_scaffold_2216_6
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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3040..4221
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI000361D525
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADB74367.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophil
extracellular ligand-binding receptor
13_1_20cm_2_scaffold_2216_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4255..5133
DNA (879bp) protein (293aa)
Inner-membrane translocator n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCY3_GEOOG
Inner-membrane translocator {ECO:0000313|EMBL:ADB74368.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscuru
inner-membrane translocator
13_1_20cm_2_scaffold_2216_8
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5133..6005
DNA (873bp) protein (291aa)
Amino acid ABC transporter permease n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CWP0_9BURK
putative amino-acid transmembrane ABC transporter protein; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Gallionellales_56_9_curated
amino acid ABC transporter permease
13_1_20cm_2_scaffold_2216_9
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5995..6750
DNA (756bp) protein (252aa)
ABC transporter n=1 Tax=Pseudomonas putida RepID=UPI0002EBD6C8
branched-chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
branched-chain amino acid ABC transporter ATPase
13_1_20cm_2_scaffold_2216_10
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6747..7439
DNA (693bp) protein (231aa)
amino acid ABC transporter ATPase n=1 Tax=Streptomyces sp. AA1529 RepID=UPI00031757A5
Uncharacterized protein {ECO:0000313|EMBL:EPD95838.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
ABC transporter, ATP-binding protein; putative branched-chain amino acid transport protein
13_1_20cm_2_scaffold_2216_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8381..8692)
DNA (312bp) protein (104aa)
prephenate dehydratase; K04518 prephenate dehydratase [EC:4.2.1.51] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Prephenate dehydratase (EC:4.2.1.51)
Chorismate mutase/prephenate dehydratase n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q608S2_METCA
13_1_20cm_2_scaffold_2216_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9183..10154)
DNA (972bp) protein (324aa)
branched chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Branched-chain amino acid aminotransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDV7_THET1
branched-chain amino acid aminotransferase
13_1_20cm_2_scaffold_2216_13
unknown

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comp(10407..11114)
DNA (708bp) protein (236aa)

This feature has no annotations

13_1_20cm_2_scaffold_2216_14
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(11111..12034)
DNA (924bp) protein (308aa)
ABC transporter related n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GAV0_CHLAD
ABC transporter related {ECO:0000313|EMBL:ACL24689.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus
ABC transporter-like protein
13_1_20cm_2_scaffold_2216_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12073..12438
DNA (366bp) protein (122aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_2216_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12435..13628
DNA (1194bp) protein (398aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3D3_SPHTD
selenocysteine lyase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_2216_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13638..14423
DNA (786bp) protein (262aa)
Putative oxidoreductase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7H1_CALAS
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative oxidoreductase
13_1_20cm_2_scaffold_2216_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14443..14715)
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_2216_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14715..16085)
DNA (1371bp) protein (457aa)
succinate-semialdehyde dehydrogenase (NAD(P)+); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
succinate-semialdehyde dehydrogenase (NAD(P)+) (EC:1.2.1.16)
Succinate-semialdehyde dehydrogenase (NAD(P)+) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV59_RUBXD
Displaying 19 items

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