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13_1_20cm_2_scaffold_328

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_328_trna_3
unknown

Not on your lists

comp(276..349)
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_328_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(378..887)
DNA (510bp) protein (170aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_328_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

930..1373
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H4A6_9SPHN
putative CoA-binding protein; K06929 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative CoA-binding protein
13_1_20cm_2_scaffold_328_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1384..1890)
DNA (507bp) protein (169aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_328_4
R_OD1_Nomurabacteria_33_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1998..2471
DNA (474bp) protein (158aa)
Membrane protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IX10_HERSS
putative small integral membrane protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_33_12_curated
membrane protein
13_1_20cm_2_scaffold_328_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2620..3372
DNA (753bp) protein (251aa)
Intein-containing protein n=1 Tax=sediment metagenome RepID=D9PKQ5_9ZZZZ
Intein-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_328_trna_1
unknown

Not on your lists

3387..3469
DNA (83bp)
transferRNA
13_1_20cm_2_scaffold_328_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3482..4873)
DNA (1392bp) protein (464aa)
MATE efflux family protein n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5F7_9BACI
MATE efflux family protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
sodium-driven multidrug efflux pump protein
13_1_20cm_2_scaffold_328_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4870..5817)
DNA (948bp) protein (316aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Selenide, water dikinase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFS3_9CHLR
selenide, water dikinase
13_1_20cm_2_scaffold_328_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5931..6116)
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_328_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6113..7258)
DNA (1146bp) protein (382aa)
FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glycine/D-amino acid oxidases (Deaminating) alias=RBG1_1223,RBG1_C00001G01223 id=1250781 tax=RBG1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria
FAD dependent oxidoreductase
13_1_20cm_2_scaffold_328_trna_2
unknown

Not on your lists

7317..7399
DNA (83bp)
transferRNA
13_1_20cm_2_scaffold_328_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8261..9898)
DNA (1638bp) protein (546aa)
Extracellular solute-binding protein family 5 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C367_SPHTD rbh
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
family 5 extracellular solute-binding protein
13_1_20cm_2_scaffold_328_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9899..10123)
DNA (225bp) protein (75aa)
Preprotein translocase, SecG subunit n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2D3_DEHLB
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
preprotein translocase subunit SecG
13_1_20cm_2_scaffold_328_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10148..11584)
DNA (1437bp) protein (479aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_328_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11581..13101)
DNA (1521bp) protein (507aa)
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=Chloroflexus RepID=GPMI_CHLAA
13_1_20cm_2_scaffold_328_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(13098..13841)
DNA (744bp) protein (248aa)
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_16_RIF_CHLX_72_14_curated
Triosephosphate isomerase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCN6_ANADF
tpiA; triosephosphate isomerase
13_1_20cm_2_scaffold_328_15
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13841..14719)
DNA (879bp) protein (293aa)
UPF0042 nucleotide-binding protein DESHY_110519 n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E7T3_9FIRM
Nucleotide-binding protein DESHY_110519 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfoto
hypothetical protein
13_1_20cm_2_scaffold_328_16
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(14725..15096)
DNA (372bp) protein (124aa)
membrane protein n=1 Tax=Nesterenkonia sp. F RepID=UPI000255C8A9
hypothetical protein; K08972 putative membrane protein Tax=GWB2_Chloroflexi_54_36_curated
hypothetical protein
13_1_20cm_2_scaffold_328_17
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(15117..15950)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00035D3F76
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=RBG_16_Chloroflexi_57_11_curated
ABC transporter permease
13_1_20cm_2_scaffold_328_18
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15950..16792)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00036532ED
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
ABC transporter permease
13_1_20cm_2_scaffold_328_19
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(16789..17811)
DNA (1023bp) protein (341aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZT4_ANATU
putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_16_Chloroflexi_57_11_curated
putative ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_328_20
unknown

Not on your lists

comp(17808..18209)
DNA (402bp) protein (134aa)

This feature has no annotations

Displaying 23 items

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