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13_1_20cm_2_scaffold_3959

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3959_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3..485
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LCU4_9BACL
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_3959_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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600..1076
DNA (477bp) protein (159aa)
Putative membrane protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F674_ACIC5
Putative membrane protein {ECO:0000313|EMBL:ACO33822.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain
hypothetical protein
13_1_20cm_2_scaffold_3959_trna_1
unknown

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comp(1253..1327)
DNA (75bp)
transferRNA
13_1_20cm_2_scaffold_3959_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1318..1698)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E7Y8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10186.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
hypothetical protein
13_1_20cm_2_scaffold_3959_4
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1764..2993
DNA (1230bp) protein (410aa)
NAD(P)H-nitrite reductase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3L3_9FIRM
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:EKP95674.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Th
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_2_scaffold_3959_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2993..3658
DNA (666bp) protein (222aa)
Csw020 n=1 Tax=uncultured bacterium RepID=Q6WLC7_9BACT
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_3959_6
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3735..4208
DNA (474bp) protein (158aa)
RDD domain-containing protein n=1 Tax=Serinicoccus profundi RepID=UPI000255EA98
Uncharacterized protein {ECO:0000313|EMBL:KJK12416.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
13_1_20cm_2_scaffold_3959_7
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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4571..5410
DNA (840bp) protein (280aa)
Phosphate binding protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5W7_DESAP
Phosphate binding protein {ECO:0000313|EMBL:ACA60447.1}; Flags: Precursor;; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="De
phosphate binding protein
13_1_20cm_2_scaffold_3959_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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5412..7214
DNA (1803bp) protein (601aa)
Sensor protein (EC:2.7.13.3)
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IJN9_9PLAN
two-component hybrid sensor and regulator Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
13_1_20cm_2_scaffold_3959_9
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(7179..7673)
DNA (495bp) protein (165aa)
Homoaconitase small subunit; Short=HACN;; EC=4.2.1.36;; Homoaconitate hydratase; TaxID=262724 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus ther
Homoaconitase small subunit n=1 Tax=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) RepID=HACB_THET2
homoaconitate hydratase small subunit
13_1_20cm_2_scaffold_3959_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7674..9053)
DNA (1380bp) protein (460aa)
hacA; homoaconitase, large subunit (EC:4.2.1.36); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hacA; homoaconitase, large subunit (EC:4.2.1.36)
3-isopropylmalate dehydratase large subunit n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PJX8_THESS
13_1_20cm_2_scaffold_3959_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9038..10168)
DNA (1131bp) protein (377aa)
putative 2-isopropylmalate synthase; K01655 homocitrate synthase [EC:2.3.3.14] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative 2-isopropylmalate synthase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZS9_CALAS
putative 2-isopropylmalate synthase
13_1_20cm_2_scaffold_3959_12
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10557..11141
DNA (585bp) protein (195aa)
Response receiver CheY associated with MCPs of class 40H n=2 Tax=Geobacter sulfurreducens RepID=D7ALC3_GEOSK
Chemotaxis protein CheY {ECO:0000313|EMBL:KIE41837.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
cheY40H-2; response receiver CheY associated with MCPs of class 40H
13_1_20cm_2_scaffold_3959_13
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11315..11770
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIY2_ANADF
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
hypothetical protein
13_1_20cm_2_scaffold_3959_14
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11780..12136)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6A4B7
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
13_1_20cm_2_scaffold_3959_15
unknown

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comp(12141..12542)
DNA (402bp) protein (134aa)

This feature has no annotations

Displaying 16 items

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