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13_1_20cm_2_scaffold_4825

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4825_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1..378)
DNA (378bp) protein (126aa)
arylformamidase (EC:3.5.1.9)
Arylformamidase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WQA8_GEOS8
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_4825_2
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(375..974)
DNA (600bp) protein (200aa)
Similar to alcohol dehydrogenase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWV1_9BACT
glucose dehydrogenase Tax=CG_Delta_02
Alcohol dehydrogenase GroES domain protein
13_1_20cm_2_scaffold_4825_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1429..2115
DNA (687bp) protein (229aa)
orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Orotate phosphoribosyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2A7_SPHTD
orotate phosphoribosyltransferase
13_1_20cm_2_scaffold_4825_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2112..2453
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1M0_SPHTD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_4825_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(2341..3273)
DNA (933bp) protein (311aa)
methyltransferase n=1 Tax=Acidovorax avenae RepID=UPI00030217D7
3-demethylubiquinone-9 3-methyltransferase Tax=CSP1_3_Armatimonadetes
methyltransferase type 11
13_1_20cm_2_scaffold_4825_6
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3296..4471
DNA (1176bp) protein (392aa)
Tetracycline resistance protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DI27_BRAJP
MFS transporter {ECO:0000313|EMBL:KGT76600.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
MFS transporter
13_1_20cm_2_scaffold_4825_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4494..5390
DNA (897bp) protein (299aa)
glyoxylate reductase (EC:1.1.1.26)
Glyoxylate reductase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=GYAR_KORCO
D-isomer specific 2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_4825_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5387..6010
DNA (624bp) protein (208aa)
hypothetical protein; K06889 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_4825_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5995..6252
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_4825_10
unknown

Not on your lists

comp(6325..6726)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_20cm_2_scaffold_4825_trna_1
unknown

Not on your lists

6820..6891
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_4825_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6937..7680
DNA (744bp) protein (248aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U3C0_DEIML
extradiol ring-cleavage dioxygenase class III protein subunit B Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
extradiol ring-cleavage dioxygenase class III protein subunit B
13_1_20cm_2_scaffold_4825_12
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7730..8779)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000364948F
PAS domain-containing protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
PAS domain-containing protein
13_1_20cm_2_scaffold_4825_13
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8999..11233
DNA (2235bp) protein (745aa)
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:AEV88087.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AEV88087.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromono
integral membrane sensor hybrid histidine kinase (EC:2.7.13.3)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SID3_ACTS5
13_1_20cm_2_scaffold_4825_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11541..12566
DNA (1026bp) protein (342aa)
Two-component response regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_4825_15
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12563..14590
DNA (2028bp) protein (676aa)
HAMP/GGDEF/EAL domain protein n=1 Tax=Pseudomonas syringae pv. syringae SM RepID=S3N1C9_PSESY
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AKF50143.1}; TaxID=1324932 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas s
GGDEF
13_1_20cm_2_scaffold_4825_16
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14630..17896)
DNA (3267bp) protein (1089aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L2V5_9CYAN
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:ACL45882.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" s
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
13_1_20cm_2_scaffold_4825_17
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(18062..19177)
DNA (1116bp) protein (372aa)
glycine/D-amino acid oxidase (EC:1.4.3.-) Tax=CG_Deferri_01
FAD dependent oxidoreductase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIJ7_RHOM4
FAD dependent oxidoreductase
13_1_20cm_2_scaffold_4825_18
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

19265..23221
DNA (3957bp) protein (1319aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QB68_9NOSO rbh
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AFY42366.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
endonuclease/exonuclease/phosphatase rbh
13_1_20cm_2_scaffold_4825_19
Hyphomonas sp. BRH_c22, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23231..23653)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RC69_9BURK
Ketosteroid isomerase {ECO:0000313|EMBL:KJS38836.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BRH_c2
putative uncharacterized protein
13_1_20cm_2_scaffold_4825_20
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23735..24100
DNA (366bp) protein (122aa)
Glyoxalase family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LQM2_RUEPO
Glyoxalase family protein {ECO:0000313|EMBL:AAV95720.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (
glyoxalase family protein
13_1_20cm_2_scaffold_4825_21
unknown

Not on your lists

comp(24114..24206)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 22 items

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