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13_1_20cm_2_scaffold_597

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_597_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3..2369
DNA (2367bp) protein (789aa)
Chromosome partition protein Smc n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJD9_THEM7
RecF/RecN/SMC N-terminal domain-containing protein; K03529 chromosome segregation protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
chromosome segregation protein SMC
13_1_20cm_2_scaffold_597_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2385..3293
DNA (909bp) protein (303aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEM2_RHOM4
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
signal recognition particle-docking protein FtsY
13_1_20cm_2_scaffold_597_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3293..4051
DNA (759bp) protein (253aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MJF5_9PROT
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
13_1_20cm_2_scaffold_597_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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4156..5511
DNA (1356bp) protein (452aa)
Signal recognition particle protein n=1 Tax=Selenomonas artemidis F0399 RepID=E7N4G9_9FIRM
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
signal recognition particle subunit FFH/SRP54 (srp54)
13_1_20cm_2_scaffold_597_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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5588..5857
DNA (270bp) protein (90aa)
30S ribosomal protein S16 n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WFB8_9FIRM
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S16
13_1_20cm_2_scaffold_597_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5854..6114
DNA (261bp) protein (87aa)
UPF0109 protein bpr_I1564 n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RV31_BUTPB
RNA binding protein; K06960 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
RNA binding protein
13_1_20cm_2_scaffold_597_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6155..6610
DNA (456bp) protein (152aa)
Ribosome maturation factor RimM n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMW9_9FIRM
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Ribosome maturation factor rimM
13_1_20cm_2_scaffold_597_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6607..7608
DNA (1002bp) protein (334aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=TRMD_CHLAD
13_1_20cm_2_scaffold_597_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


7679..8032
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CR34_DESK7
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L19
13_1_20cm_2_scaffold_597_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8095..8769
DNA (675bp) protein (225aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Ribonuclease HII n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HLR0_CYAP4
rnhB; ribonuclease HII
13_1_20cm_2_scaffold_597_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8766..9719
DNA (954bp) protein (318aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SKG9_9BACT
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
N-acetyltransferase GCN5
13_1_20cm_2_scaffold_597_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9762..11642
DNA (1881bp) protein (627aa)
Quinoprotein glucose dehydrogenase (EC:1.1.5.2)
glucose dehydrogenase n=1 Tax=Agromyces subbeticus RepID=UPI0003B7BB93
glucose sorbosone dehydrogenase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_597_13
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11686..12021
DNA (336bp) protein (112aa)
UPF0102 protein Celgi_2104 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A040_CELGA
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
13_1_20cm_2_scaffold_597_14
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12033..13151
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NWR7_GRAMM
Uncharacterized protein {ECO:0000313|EMBL:AEU38954.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella malle
hypothetical protein
13_1_20cm_2_scaffold_597_15
unknown

Not on your lists

comp(13110..14042)
DNA (933bp) protein (311aa)

This feature has no annotations

13_1_20cm_2_scaffold_597_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14550..15257)
DNA (708bp) protein (236aa)
Extracellular solute-binding protein, family 3 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3D3_POLGS
extracellular solute-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Extracellular solute-binding protein, family 3
Displaying 16 items

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