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13_1_20cm_2_scaffold_1914

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1914_1
unknown

Not on your lists

comp(1..177)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_2_scaffold_1914_2
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

784..2574
DNA (1791bp) protein (597aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000364BC32 rbh
fadD; Long-chain acyl-CoA synthetase Tax=RBG_16_Aminicenantes_66_30_curated
fadD; Long-chain acyl-CoA synthetase
13_1_20cm_2_scaffold_1914_3
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2513..3472)
DNA (960bp) protein (320aa)
DNA-formamidopyrimidine glycosylase {ECO:0000313|EMBL:ACG75243.1}; EC=3.2.2.23 {ECO:0000313|EMBL:ACG75243.1};; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystob
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
DNA-formamidopyrimidine glycosylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGG1_ANASK
13_1_20cm_2_scaffold_1914_4
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(3521..4288)
DNA (768bp) protein (256aa)
id=1251111 Tax=RBG_16_Zixibacteria_43_9_curated
13_1_20cm_2_scaffold_1914_5
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(4342..4548)
DNA (207bp) protein (69aa)
id=1250724 Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
alias=RBG1_1166,RBG1_C00001G01166 id=1250724 tax=RBG1
13_1_20cm_2_scaffold_1914_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4783..5403)
DNA (621bp) protein (207aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2W4_DESAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Fis family transcriptional regulator
13_1_20cm_2_scaffold_1914_7
unknown

Not on your lists

5521..5616
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_20cm_2_scaffold_1914_8
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5577..6950)
DNA (1374bp) protein (458aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTW0_HALO1
Fis family transcriptional regulator Tax=RBG_16_Gammaproteobacteria_66_13_curated
Fis family transcriptional regulator
13_1_20cm_2_scaffold_1914_9
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6947..8404)
DNA (1458bp) protein (486aa)
Sensor protein (EC:2.7.13.3) Tax=RBG_16_Gammaproteobacteria_66_13_curated
Sensor protein (EC:2.7.13.3)
Putative Sensor protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFS3_9BACT rbh
13_1_20cm_2_scaffold_1914_10
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8352..9863)
DNA (1512bp) protein (504aa)
Metallo-beta-lactamase family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTP5_9PLAN
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EAQ80039.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Bla
beta-lactamase
13_1_20cm_2_scaffold_1914_11
GWC2_Planctomycetes_49_10_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(9860..10255)
DNA (396bp) protein (132aa)
hypothetical protein Tax=GWC2_Planctomycetes_49_10_curated
13_1_20cm_2_scaffold_1914_12
unknown

Not on your lists

comp(10252..10704)
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_20cm_2_scaffold_1914_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10701..11285)
DNA (585bp) protein (195aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMD0_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF58972.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_2_scaffold_1914_14
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11365..11886)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK01_9BACT
hypothetical protein; K06006 periplasmic protein CpxP Tax=GWF2_Lentisphaerae_57_35_curated
CpxP superfamily protein
13_1_20cm_2_scaffold_1914_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

12086..13414
DNA (1329bp) protein (443aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Ste24 endopeptidase (EC:3.4.24.84)
peptidase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B6D947
13_1_20cm_2_scaffold_1914_16
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

13436..15715
DNA (2280bp) protein (760aa)
FG-GAP repeat protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQK0_OPITP
FG-GAP repeat protein {ECO:0000313|EMBL:ACB75609.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain
FG-GAP repeat-containing protein
13_1_20cm_2_scaffold_1914_17
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15787..17529)
DNA (1743bp) protein (581aa)
FAD dependent oxidoreductase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUM3_SOLCM
FAD dependent oxidoreductase {ECO:0000313|EMBL:AFD07447.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" so
FAD dependent oxidoreductase
13_1_20cm_2_scaffold_1914_18
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17533..17679)
DNA (147bp) protein (49aa)
LemA family protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A3B88C
hypothetical protein Tax=GWA2_Deltaproteobacteria_45_12_curated
LemA family protein
13_1_20cm_2_scaffold_1914_19
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18041..18799)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AF2_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:AKF11276.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
13_1_20cm_2_scaffold_1914_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18848..19600)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYU9_CLOA9
Beta-propeller domains of methanol dehydrogenase type {ECO:0000313|EMBL:AKF11275.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; S
hypothetical protein
13_1_20cm_2_scaffold_1914_21
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19687..20661)
DNA (975bp) protein (325aa)
zinc-containing alcohol dehydrogenase superfamily protein; K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Quinone oxidoreductase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P246_AROAE rbh
qor; quinone oxidoreductase
13_1_20cm_2_scaffold_1914_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20714..21367)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. AR RepID=I2K7Z9_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
13_1_20cm_2_scaffold_1914_23
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21381..21914)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PK90_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX64645.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_20cm_2_scaffold_1914_24
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21933..22265)
DNA (333bp) protein (111aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; L
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035F8BDC
protein of unknown function [AhpD domain]
13_1_20cm_2_scaffold_1914_25
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(22301..22864)
DNA (564bp) protein (188aa)
DSBA oxidoreductase n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M1B3_ANAVT
DSBA oxidoreductase {ECO:0000313|EMBL:ABA25230.1}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
DSBA oxidoreductase
13_1_20cm_2_scaffold_1914_26
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22857..23528)
DNA (672bp) protein (224aa)
Putative 1-cysteine peroxiredoxin {ECO:0000313|EMBL:CAJ36671.1}; EC=1.11.1.15 {ECO:0000313|EMBL:CAJ36671.1};; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocel
prx1-1; putative 1-cysteine peroxiredoxin (EC:1.11.1.15)
Putative 1-cysteine peroxiredoxin n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4M2_UNCMA
13_1_20cm_2_scaffold_1914_27
unknown

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23637..23759
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 27 items

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