ggKbase home page

13_1_20cm_2_scaffold_3683

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3683_1
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

2..3352
DNA (3351bp) protein (1117aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Transcription-repair-coupling factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV1_KORVE
transcription-repair coupling factor
13_1_20cm_2_scaffold_3683_2
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

3454..4365
DNA (912bp) protein (304aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BGP4_MEISD
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_20cm_2_scaffold_3683_3

Not on your lists

4313..5530
DNA (1218bp) protein (406aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=698389 species="Bacteria; environmental samples.;" source="uncultured bacterium 293.;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=uncultured bacterium 293 RepID=E3T605_9BACT
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_20cm_2_scaffold_3683_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

5754..6146
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CR9_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_20cm_2_scaffold_3683_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6211..7305
DNA (1095bp) protein (365aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9E3_GEOUR
13_1_20cm_2_scaffold_3683_6
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7292..8299)
DNA (1008bp) protein (336aa)
inositol monophosphatase n=1 Tax=Methyloversatilis universalis RepID=UPI00038274BA
Inositol-1-monophosphatase {ECO:0000313|EMBL:EGK73379.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversat
inositol monophosphatase
13_1_20cm_2_scaffold_3683_7
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8280..8780)
DNA (501bp) protein (167aa)
Tyrosine recombinase XerC n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UII0_ANASK
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
tyrosine recombinase XerC
13_1_20cm_2_scaffold_3683_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8747..9268)
DNA (522bp) protein (174aa)
tyrosine recombinase XerC n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B76D0D
tyrosine recombinase XerD subunit; K03733 integrase/recombinase XerC Tax=GWC2_Rokubacteria_70_16_curated
site-specific recombinase XerD
13_1_20cm_2_scaffold_3683_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9397..11013
DNA (1617bp) protein (539aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I536_DESAP
13_1_20cm_2_scaffold_3683_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11128..11385
DNA (258bp) protein (86aa)
UPI0003D00F1F related cluster n=1 Tax=unknown RepID=UPI0003D00F1F
Uncharacterized protein {ECO:0000313|EMBL:KFE67088.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
13_1_20cm_2_scaffold_3683_11
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11523..12083
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NH8_SOLUE
DNA repair protein {ECO:0000313|EMBL:EWT05674.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
13_1_20cm_2_scaffold_3683_12
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

12115..12885
DNA (771bp) protein (257aa)
HAD-superfamily subfamily IIA hydrolase like protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J0F9_9BACT
HAD family hydrolase {ECO:0000313|EMBL:AHF89590.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
HAD family hydrolase
13_1_20cm_2_scaffold_3683_13
unknown

Not on your lists

comp(12890..13483)
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_20cm_2_scaffold_3683_14
unknown

Not on your lists

comp(13467..15269)
DNA (1803bp) protein (601aa)

This feature has no annotations

13_1_20cm_2_scaffold_3683_15
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15412..15873)
DNA (462bp) protein (154aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAA
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PLE2_9FIRM
hypothetical protein
Displaying 15 items

View Taxonomy