ggKbase home page

13_1_20cm_2_scaffold_553

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_553_1

Not on your lists

1..417
DNA (417bp) protein (139aa)
Sigma-24, ECF subfamily (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6PWX1_9ZZZZ
Marine sediment metagenome DNA, contig: S01H1_C00013 {ECO:0000313|EMBL:GAF70177.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
RNA polymerase ECF-type sigma factor
13_1_20cm_2_scaffold_553_2
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

Not on your lists

414..1286
DNA (873bp) protein (291aa)
hypothetical protein Tax=RBG_13_Aminicenantes_64_14_curated
13_1_20cm_2_scaffold_553_3
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

1276..2208
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003723D7F
hypothetical protein Tax=RBG_13_Aminicenantes_59_9_curated
13_1_20cm_2_scaffold_553_4
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(2227..4524)
DNA (2298bp) protein (766aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P972_9BACT
TPR Domain containing protein Tax=CG_Dehalo_01
hypothetical protein
13_1_20cm_2_scaffold_553_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4816..5049
DNA (234bp) protein (78aa)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
putative cytoplasmic protein alias=scaffold_2_151,RBG2_C00002G00151 id=1241433 tax=RBG2 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria
13_1_20cm_2_scaffold_553_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

5042..6076
DNA (1035bp) protein (345aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Putative kinase, galactokinase and mevalonate kinase like protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIF0_CHLTF
putative kinase
13_1_20cm_2_scaffold_553_7
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

6231..7019
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1G664_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD41329.1, ECO:0000313|EnsemblProtists:EOD41329}; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emili
pollen-specific leucine-rich repeat extensin-like protein 1-like
13_1_20cm_2_scaffold_553_8
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

7087..7608
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-J15 RepID=UPI000372FD28
hypothetical protein Tax=RBG_16_Aminicenantes_63_16_curated
hypothetical protein
13_1_20cm_2_scaffold_553_9
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(7605..8285)
DNA (681bp) protein (227aa)
putative rhomboid serine protease (EC:3.4.21.105) Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
Rhomboid family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LF69_9BACT
peptidase, S54 (Rhomboid) family
13_1_20cm_2_scaffold_553_10
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

8506..10485
DNA (1980bp) protein (660aa)
deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=CG_Deferri_01
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B73036 rbh
13_1_20cm_2_scaffold_553_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10482..11996
DNA (1515bp) protein (505aa)
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1)
leucyl aminopeptidase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AF5E
13_1_20cm_2_scaffold_553_12
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12030..12566
DNA (537bp) protein (179aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7H1_CHLAD
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;"
molybdenum cofactor synthesis domain-containing protein
13_1_20cm_2_scaffold_553_13
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

12550..14625
DNA (2076bp) protein (692aa)
glycerol 3-phosphate dehydrogenase (quinone) subunit C (EC:1.1.5.3); K06911 Tax=CG_Arma_01
glycerol 3-phosphate dehydrogenase (quinone) subunit C (EC:1.1.5.3)
Glycerol 3-phosphate dehydrogenase (Quinone) subunit C n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTJ0_ACEAZ
13_1_20cm_2_scaffold_553_14
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

14570..15448
DNA (879bp) protein (293aa)
glycerol 3-phosphate dehydrogenase (quinone) subunit C (EC:1.1.5.3); K06911 Tax=CG_Arma_01
glycerol 3-phosphate dehydrogenase (quinone) subunit C (EC:1.1.5.3)
Glycerol 3-phosphate dehydrogenase (Quinone) subunit C n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTJ0_ACEAZ
13_1_20cm_2_scaffold_553_15
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15823..16356
DNA (534bp) protein (178aa)
Carbonic anhydrases/acetyltransferases isoleucine patch superfamily n=1 Tax=Roseburia sp. CAG:380 RepID=R6VAQ0_9FIRM
Carbonic anhydrases/acetyltransferases isoleucine patch superfamily {ECO:0000313|EMBL:CDC94235.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; e
hexapeptide repeat-containing acetyltransferase
13_1_20cm_2_scaffold_553_16
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

16353..17369
DNA (1017bp) protein (339aa)
DHH domain-containing protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A5N4_MELRP
DHH domain-containing protein Tax=RBG_13_RIF03_48_7_curated
phosphoesterase RecJ domain protein
13_1_20cm_2_scaffold_553_17
unknown

Not on your lists

17456..17839
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_20cm_2_scaffold_553_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(17867..19675)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VKN1_9MICO
metal-binding protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
ferredoxin
13_1_20cm_2_scaffold_553_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(19699..19881)
DNA (183bp) protein (61aa)
hypothetical protein; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 19 items

View Taxonomy