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13_1_20cm_2_scaffold_708

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_708_1
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..671)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BB43_9GAMM
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein
13_1_20cm_2_scaffold_708_2
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(846..1115)
DNA (270bp) protein (90aa)
SWIB domain-containing protein possibly involved in chromatin remodeling n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LHP5_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
13_1_20cm_2_scaffold_708_3
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1221..2537)
DNA (1317bp) protein (439aa)
Putative chromate transport protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XM90_DESMR rbh
2A51: chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:AHY47860.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrob
2A51: chromate transporter, chromate ion transporter (CHR) family
13_1_20cm_2_scaffold_708_4
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(2534..2863)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAT6_9BACT
hypothetical protein; K09922 hypothetical protein Tax=GWF2_Planctomycetes_50_10_curated
hypothetical protein
13_1_20cm_2_scaffold_708_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2860..3420)
DNA (561bp) protein (187aa)
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
13_1_20cm_2_scaffold_708_6
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(3603..4232)
DNA (630bp) protein (210aa)
putative transmembrane protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630661
isoprenylcysteine carboxyl methyltransferase Tax=RBG_16_KB1_OP1_55_9_curated
isoprenylcysteine carboxyl methyltransferase family protein
13_1_20cm_2_scaffold_708_7
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(4275..4640)
DNA (366bp) protein (122aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein alias=RBG9_66_37,RBG9_C00066G00037 id=1247753 tax=RBG9 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae
hypothetical protein
13_1_20cm_2_scaffold_708_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4654..6126)
DNA (1473bp) protein (491aa)
aldehyde dehydrogenase (acceptor); K00130 betaine-aldehyde dehydrogenase [EC:1.2.1.8] Tax=RBG_16_Acidobacteria_70_10_curated
Aldehyde dehydrogenase (Acceptor) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG3_KORVE
aldehyde dehydrogenase
13_1_20cm_2_scaffold_708_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

6302..6793
DNA (492bp) protein (164aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021R7_SOLUE
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABJ84308.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_2_scaffold_708_10
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

6907..7998
DNA (1092bp) protein (364aa)
acdA2; acyl-CoA dehydrogenase (EC:1.3.99.3); K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=GWB1_Bdellovibrionales_55_8_curated
acdA2; acyl-CoA dehydrogenase (EC:1.3.99.3)
Putative acyl-CoA dehydrogenase n=1 Tax=Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 RepID=N1VSE4_9LEPT
13_1_20cm_2_scaffold_708_11
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(8159..8851)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C5T7_9BACT
putative histidine secretory acid phosphatase Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
13_1_20cm_2_scaffold_708_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8998..10479)
DNA (1482bp) protein (494aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
hypothetical protein, partial n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003626425
methylmalonic acid semialdehyde dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_708_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10520..11455)
DNA (936bp) protein (312aa)
Probable RNA methyltransferase Adeh_4229 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Y4229_ANADE
ribosomal RNA large subunit methyltransferase N Tax=RBG_16_Acidobacteria_70_10_curated
ribosomal RNA large subunit methyltransferase N
13_1_20cm_2_scaffold_708_14
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11629..12861)
DNA (1233bp) protein (411aa)
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.13); K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
Ornithine aminotransferase n=1 Tax=Anoxybacillus sp. SK3-4 RepID=T0BFR2_9BACI rbh
rocD; ornithine--oxo-acid transaminase
13_1_20cm_2_scaffold_708_15
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12937..16092)
DNA (3156bp) protein (1052aa)
Acriflavin resistance protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G432_GEOUR
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CSP1_8_Deltaproteobacteria
acriflavin resistance protein
13_1_20cm_2_scaffold_708_16
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(16089..17261)
DNA (1173bp) protein (391aa)
Efflux pump, RND family, membrane fusion lipoprotein n=2 Tax=Geobacter metallireducens RepID=Q39V42_GEOMG
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=CG_Nitrosp_02
RND family efflux pump membrane fusion lipoprotein
13_1_20cm_2_scaffold_708_17
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(17258..18709)
DNA (1452bp) protein (484aa)
Outer membrane efflux protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HB96_ANADF rbh
outer membrane efflux protein Tax=RBG_13_OP8X_37_8_curated
outer membrane efflux protein
13_1_20cm_2_scaffold_708_18
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(18706..19371)
DNA (666bp) protein (222aa)
Transcriptional regulator, TetR family n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZV1_9DELT
TetR family transcriptional regulator Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
TetR family transcriptional regulator
13_1_20cm_2_scaffold_708_19
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19676..20668)
DNA (993bp) protein (331aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RBG_16_Planctomycetes_64_10_curated
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L514_KORCO rbh
13_1_20cm_2_scaffold_708_20
R_Omnitrophica_50_24, Omnitrophica, Bacteria

Not on your lists

comp(20698..21795)
DNA (1098bp) protein (366aa)
small mechanosensitive ion channel protein MscS n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B55B62 rbh
MscS Mechanosensitive ion channel Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_50_24_curated
MscS Mechanosensitive ion channel
13_1_20cm_2_scaffold_708_21
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21814..23142)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FI73_DESAA
Uncharacterized protein {ECO:0000313|EMBL:ACL02640.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfat
hypothetical protein
13_1_20cm_2_scaffold_708_22
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23184..23660
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036DA99C
Uncharacterized protein {ECO:0000313|EMBL:KGM52887.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
hypothetical protein
13_1_20cm_2_scaffold_708_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

23806..25029
DNA (1224bp) protein (408aa)
RND family efflux transporter MFP subunit n=1 Tax=Xanthomonas sacchari NCPPB 4393 RepID=UPI000262B1A0 alias=16ft_combo_ws3_scaffold_361_30 id=5224884 tax=16ft_combo_ws3 species=Xanthomonas sacchari NCPPB 4393 genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria
RND family efflux transporter MFP subunit Tax=RBG_16_RIF_WS3X_71_46_curated
RND family efflux transporter MFP subunit
13_1_20cm_2_scaffold_708_24
RLO_PLX_64_10, Bacteria

Not on your lists

25049..27922
DNA (2874bp) protein (958aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JKG1_9GAMM alias=16ft_combo_ws3_scaffold_361_29 id=5224883 tax=16ft_combo_ws3 species=Gallaecimonas xiamenensis 3-C-1 genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria rbh
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
acriflavin resistance protein
Displaying 24 items

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