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13_1_20cm_2_scaffold_1391

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1391_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36..497)
DNA (462bp) protein (154aa)
(2Fe-2S)-binding protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QLE3_RALPI
Isoquinoline 1-oxidoreductase alpha subunit {ECO:0000313|EMBL:EYF01182.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces
(2Fe-2S)-binding protein
13_1_20cm_2_scaffold_1391_2
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(803..1354)
DNA (552bp) protein (184aa)
Acetyltransferase, GNAT family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QMW2_9DELT
Acetyltransferase {ECO:0000313|EMBL:KFA92395.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobac
acetyltransferase
13_1_20cm_2_scaffold_1391_3
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1351..2919)
DNA (1569bp) protein (523aa)
GMC oxidoreductase family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MN35_CORCM rbh
GMC oxidoreductase family protein {ECO:0000313|EMBL:AFE08346.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" s
choD1; GMC oxidoreductase family protein
13_1_20cm_2_scaffold_1391_4
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2932..3336)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E9E7_9BACT
hit1; histidine triad protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_Anaeromyxobacter_69_14_curated
histidine triad (HIT) protein
13_1_20cm_2_scaffold_1391_5
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

3459..3842
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDD1_9PLAN
DoxX family protein Tax=RBG_13_Actinobacteria_63_9_curated
DoxX family protein
13_1_20cm_2_scaffold_1391_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3864..4328)
DNA (465bp) protein (155aa)
Membrane protein-like protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RP68_9BURK
Membrane protein-like protein; K08983 putative membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
membrane protein-like protein
13_1_20cm_2_scaffold_1391_7
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4409..5284)
DNA (876bp) protein (292aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUI3_9RHIZ rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:AIQ59254.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
alpha/beta hydrolase
13_1_20cm_2_scaffold_1391_8
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5317..6219)
DNA (903bp) protein (301aa)
Transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB49_9DELT
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:KIG19306.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa sali
LysR family transcriptional regulator
13_1_20cm_2_scaffold_1391_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6245..7006)
DNA (762bp) protein (254aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88972.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_2_scaffold_1391_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7122..7679)
DNA (558bp) protein (186aa)
Sigma-24 n=1 Tax=Marinobacter algicola DG893 RepID=A6EUL5_9ALTE
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG88971.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_2_scaffold_1391_11
unknown

Not on your lists

7742..8020
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_2_scaffold_1391_12
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8177..9340)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P0W0_9DELT
Uncharacterized protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_1391_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9337..9882)
DNA (546bp) protein (182aa)
Putative secreted protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P3A8_9DELT
Putative secreted protein {ECO:0000313|EMBL:EPX56747.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="
YceI family protein
13_1_20cm_2_scaffold_1391_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9907..10752)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I8G2_METB6
Uncharacterized protein {ECO:0000313|EMBL:AKF04126.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
13_1_20cm_2_scaffold_1391_15
unknown

Not on your lists

comp(11451..12107)
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_20cm_2_scaffold_1391_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12385..12795
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289BEFA
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36837.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
hypothetical protein
13_1_20cm_2_scaffold_1391_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12797..14227
DNA (1431bp) protein (477aa)
YVTN family beta-propeller repeat protein n=1 Tax=Rhizobium sp. CF142 RepID=J2AQW0_9RHIZ
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:KFC74452.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" sourc
40-residue YVTN family beta-propeller repeat-containing protein
13_1_20cm_2_scaffold_1391_18
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

14272..14682
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4D2FC
Uncharacterized protein {ECO:0000313|EMBL:KIF35132.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
13_1_20cm_2_scaffold_1391_19
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14689..15357)
DNA (669bp) protein (223aa)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
13_1_20cm_2_scaffold_1391_20
unknown

Not on your lists

comp(15510..18560)
DNA (3051bp) protein (1017aa)

This feature has no annotations

13_1_20cm_2_scaffold_1391_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18659..19030)
DNA (372bp) protein (124aa)
RNA polymerase sigma 70 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRX4_SORCE
RNA polymerase sigma 70 {ECO:0000313|EMBL:AGP35927.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
RNA polymerase sigma 70
Displaying 21 items

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