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13_1_20cm_2_scaffold_1867

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1867_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..494)
DNA (492bp) protein (164aa)
Putative membrane-bound ClpP-class protease n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QTS2_9DELT
Peptidase S14 {ECO:0000313|EMBL:KFA92016.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
hypothetical protein
13_1_20cm_2_scaffold_1867_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(491..1174)
DNA (684bp) protein (228aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAG1_ANADF
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ABS25707.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Ana
phage SPO1 DNA polymerase-like protein
13_1_20cm_2_scaffold_1867_3
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1222..2391)
DNA (1170bp) protein (390aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:ABS25702.1}; EC=4.1.1.36 {ECO:0000313|EMBL:ABS25702.1};; EC=6.3.2.5 {ECO:0000313|EMBL:ABS25702.1};; Tax
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAF6_ANADF rbh
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
13_1_20cm_2_scaffold_1867_4
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2459..3379
DNA (921bp) protein (307aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy
sensor histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C53E9
histidine kinase
13_1_20cm_2_scaffold_1867_5
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3425..4261
DNA (837bp) protein (279aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J3Q3_NOSP7
peptidase C14 caspase catalytic subunit p20 Tax=RBG_16_Planctomycetes_64_10_curated
hypothetical protein
13_1_20cm_2_scaffold_1867_6
unknown

Not on your lists

4439..5047
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_20cm_2_scaffold_1867_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5044..5436
DNA (393bp) protein (131aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9ULM2_SPIAZ
response regulator receiver domain-containing protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
diguanylate cyclase
13_1_20cm_2_scaffold_1867_8
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(5440..6093)
DNA (654bp) protein (218aa)
cynT; carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1] Tax=GWB1_Bdellovibrionales_55_8_curated
Carbonic anhydrase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MJ17_CORCM
cynT; carbonic anhydrase
13_1_20cm_2_scaffold_1867_9
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists


comp(6096..6590)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA076-F14 RepID=UPI0003736804
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" sour
rplQ; 50S ribosomal protein L17
13_1_20cm_2_scaffold_1867_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6602..7627)
DNA (1026bp) protein (342aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P3F3_9DELT rbh
rpoA; DNA-directed RNA polymerase subunit alpha
13_1_20cm_2_scaffold_1867_11
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7712..8338)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1P6_CORCM rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source
rpsD; 30S ribosomal protein S4
13_1_20cm_2_scaffold_1867_12
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8352..8804)
DNA (453bp) protein (151aa)
30S ribosomal protein S11 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QMD5_9DELT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
rpsK; 30S ribosomal protein S11
13_1_20cm_2_scaffold_1867_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8817..9209)
DNA (393bp) protein (131aa)
30S ribosomal protein S13 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RS13_ANADF
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
rpsM; 30S ribosomal protein S13
13_1_20cm_2_scaffold_1867_14
unknown

Not on your lists

comp(9448..10080)
DNA (633bp) protein (211aa)

This feature has no annotations

13_1_20cm_2_scaffold_1867_15
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10077..10802)
DNA (726bp) protein (242aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ZH6_STIAD
13_1_20cm_2_scaffold_1867_16
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10784..11416)
DNA (633bp) protein (211aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHH5_MYXSD
adenylate kinase
13_1_20cm_2_scaffold_1867_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11437..12777)
DNA (1341bp) protein (447aa)
Protein translocase subunit SecY n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UBB9_ANASK rbh
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Anaeromyxobacter_69_14_curated
secY; preprotein translocase subunit SecY
13_1_20cm_2_scaffold_1867_18
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12872..13399)
DNA (528bp) protein (176aa)
50S ribosomal protein L15 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ZH9_STIAD
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystoba
rplO; 50S ribosomal protein L15
13_1_20cm_2_scaffold_1867_19
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13396..13665)
DNA (270bp) protein (90aa)
50S ribosomal protein L30 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=RL30_METPP
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source=
rpmD; 50S ribosomal protein L30
13_1_20cm_2_scaffold_1867_20
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13667..14185)
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P643_9DELT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystoba
rpsE; 30S ribosomal protein S5
13_1_20cm_2_scaffold_1867_21
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14270..14638)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ZI2_STIAD
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" sourc
rplR; 50S ribosomal protein L18
13_1_20cm_2_scaffold_1867_22
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14638..15180)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RL6_ANADF
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
rplF; 50S ribosomal protein L6
13_1_20cm_2_scaffold_1867_23
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15190..15588)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RS8_ANADF
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
rpsH; 30S ribosomal protein S8
13_1_20cm_2_scaffold_1867_24
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15657..15851)
DNA (195bp) protein (65aa)
30S ribosomal protein S14 type Z n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P3G4_9DELT
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae;
rpsN; 30S ribosomal protein S14
13_1_20cm_2_scaffold_1867_25
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15853..15987)
DNA (135bp) protein (45aa)
50S ribosomal protein L5 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RL5_ANADF
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
rplE; 50S ribosomal protein L5
Displaying 25 items

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