ggKbase home page

13_1_20cm_2_scaffold_2072

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2072_1
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1872
DNA (1872bp) protein (624aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1144275 species="Bacteria; Proteobac
DNA topoisomerase 1 n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MR75_CORCM rbh
topA; putative DNA protecting protein DprA/DNA topoisomerase I
13_1_20cm_2_scaffold_2072_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2028..3404
DNA (1377bp) protein (459aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000255|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000255|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransfera
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=TRMFO_ANADF rbh
tRNA (uracil-5-)-methyltransferase Gid
13_1_20cm_2_scaffold_2072_3
unknown

Not on your lists

3621..4517
DNA (897bp) protein (299aa)

This feature has no annotations

13_1_20cm_2_scaffold_2072_4
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4536..5411
DNA (876bp) protein (292aa)
Tyrosine recombinase XerC n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UII0_ANASK
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RBG_16_Anaeromyxobacter_69_14_curated
tyrosine recombinase XerC
13_1_20cm_2_scaffold_2072_5

Not on your lists

comp(5424..6452)
DNA (1029bp) protein (343aa)
D-alanine--D-alanine ligase {ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|SAAS:SAAS00232732};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Caulobacter crescentus OR37 RepID=R0CXI7_CAUCE
13_1_20cm_2_scaffold_2072_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6510..7040
DNA (531bp) protein (177aa)
ATP-dependent protease subunit HslV (EC:3.4.25.1)
ATP-dependent protease subunit HslV n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CLD2_MYXFH
Peptidase {ECO:0000313|EMBL:AKF81217.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 12
13_1_20cm_2_scaffold_2072_7
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7037..8350
DNA (1314bp) protein (438aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=HSLU_PELCD
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=483547 species="Bacteria; Proteobac
ATP-dependent protease
13_1_20cm_2_scaffold_2072_8
unknown

Not on your lists

comp(8375..8935)
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_20cm_2_scaffold_2072_9
unknown

Not on your lists

9230..9328
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_20cm_2_scaffold_2072_10
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9940..11775)
DNA (1836bp) protein (612aa)
Heat shock protein 70 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJ04_HALO1 rbh
Heat shock protein 70 {ECO:0000313|EMBL:ACY13033.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium o
heat shock protein 70
13_1_20cm_2_scaffold_2072_11
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11783..12670)
DNA (888bp) protein (296aa)
Heat shock protein DnaJ domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIH5_ANASK
Chaperone protein DnaJ {ECO:0000313|EMBL:GAO01889.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
heat shock protein DnaJ domain-containing protein
13_1_20cm_2_scaffold_2072_12
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12801..13985)
DNA (1185bp) protein (395aa)
acetylornithine aminotransferase (EC:2.6.1.11); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Acetylornithine aminotransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JER9_ANAD2 rbh
acetylornithine and succinylornithine aminotransferase
13_1_20cm_2_scaffold_2072_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14162..14914)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium Pu11 RepID=Q99IY6_9BACT
sulfur transferase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
sulfur transferase
13_1_20cm_2_scaffold_2072_14
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14917..15069)
DNA (153bp) protein (51aa)
Male sterility domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIH0_ANASK
Male sterility domain protein {ECO:0000313|EMBL:ACG74003.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
male sterility domain-containing protein
13_1_20cm_2_scaffold_2072_15
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15898..16509)
DNA (612bp) protein (204aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=502025 species="Bacteria; Pr
dephospho-CoA kinase (EC:2.7.1.24)
hypothetical protein n=1 Tax=Corynebacterium mastitidis RepID=UPI00035EBF6C
13_1_20cm_2_scaffold_2072_16
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16521..17000
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UA84_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AGC44795.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
13_1_20cm_2_scaffold_2072_17
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17001..17606
DNA (606bp) protein (202aa)
Probable GTP-binding protein EngB n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=ENGB_ANADF
Probable GTP-binding protein EngB {ECO:0000255|HAMAP-Rule:MF_00321}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
engB; ribosome biogenesis GTP-binding protein YsxC
13_1_20cm_2_scaffold_2072_18
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17599..17898)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U9D9_MYXSD
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_20cm_2_scaffold_2072_19
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18037..18381)
DNA (345bp) protein (115aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) PF6_STIAD">RepID=Q08PF6_STIAD
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO71261.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU62370.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcale
hypothetical protein
13_1_20cm_2_scaffold_2072_20
unknown

Not on your lists

18454..18573
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_2_scaffold_2072_21
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18659..18988)
DNA (330bp) protein (110aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILC1_ANADE
Uncharacterized protein {ECO:0000313|EMBL:GAO01900.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
endonuclease/exonuclease/phosphatase
13_1_20cm_2_scaffold_2072_22
unknown

Not on your lists

19028..19087
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 22 items

View Taxonomy