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13_1_20cm_2_scaffold_1004

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1004_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1878)
DNA (1878bp) protein (626aa)
Glycoside hydrolase 15-related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMG9_9CHLR
glycosyl hydrolase family protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
glycosyl hydrolase family protein
13_1_20cm_2_scaffold_1004_2
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2014..2403
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FXB8_ISOV2
Metal-dependent hydrolase {ECO:0000313|EMBL:KGM09678.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM
hypothetical protein
13_1_20cm_2_scaffold_1004_3
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2480..3517)
DNA (1038bp) protein (346aa)
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P3E9_9FIRM rbh
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:EKP95565.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis;
alcohol dehydrogenase GroES domain protein
13_1_20cm_2_scaffold_1004_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(3514..4017)
DNA (504bp) protein (168aa)
DinB family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1B9_SPHTD
DinB family protein {ECO:0000313|EMBL:ACZ38036.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="S
DinB family protein
13_1_20cm_2_scaffold_1004_5
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(4036..4938)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TFS2_BURPP
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1004_6
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

4946..7135
DNA (2190bp) protein (730aa)
adenylate/guanylate cyclase with Chase sensor; K01768 adenylate cyclase [EC:4.6.1.1] Tax=RBG_16_Chloroflexi_60_22_curated
Adenylate/guanylate cyclase with Chase sensor n=1 Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XYN5_BACIE
adenylate/guanylate cyclase with Chase sensor
13_1_20cm_2_scaffold_1004_7
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7132..8478)
DNA (1347bp) protein (449aa)
Serine/threonine protein kinase n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PB44_STRVO
Serine/threonine protein kinase {ECO:0000313|EMBL:AEM80096.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger
serine/threonine protein kinase
13_1_20cm_2_scaffold_1004_8
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8611..9003
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EXV1_9NOCA
Putative membrane protein {ECO:0000313|EMBL:AHH21456.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
putative membrane protein
13_1_20cm_2_scaffold_1004_9
unknown

Not on your lists

comp(9051..9344)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_2_scaffold_1004_10
unknown

Not on your lists

comp(9316..9612)
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_20cm_2_scaffold_1004_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(9626..10546)
DNA (921bp) protein (307aa)
DNA repair photolyase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q117_9FIRM alias=16ft_combo_ws3_scaffold_6917_3 id=5225484 tax=16ft_combo_ws3 species=Thermaerobacter subterraneus DSM 13965 genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
radical SAM protein Tax=RBG_16_RIF_WS3X_71_46_curated
radical SAM protein
13_1_20cm_2_scaffold_1004_12
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10592..11338)
DNA (747bp) protein (249aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
endonuclease III/DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWF5_ACIC1
13_1_20cm_2_scaffold_1004_13
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(11328..11798)
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Mesotoga RepID=I2F1H5_9THEM
Uncharacterized protein {ECO:0000313|EMBL:AFK05778.1}; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;"
hypothetical protein
13_1_20cm_2_scaffold_1004_14
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11825..12637
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AS85_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:BAN04035.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter cocc
hypothetical protein
13_1_20cm_2_scaffold_1004_15
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(12623..13489)
DNA (867bp) protein (289aa)
2-phospho-L-lactate transferase; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] Tax=RBG_13_Chloroflexi_60_9_curated
Lppg:fo 2-phospho-l-lactate transferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4T7_THERP
cofD; LPPG:FO 2-phospho-L-lactate transferase
13_1_20cm_2_scaffold_1004_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13525..14259)
DNA (735bp) protein (245aa)
coenzyme F420-0 gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7P8Q0_9GAMM
F420-dependent oxidoreductase
13_1_20cm_2_scaffold_1004_17
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(14256..14855)
DNA (600bp) protein (200aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SDD2_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL54168.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
hypothetical protein
13_1_20cm_2_scaffold_1004_18
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(14846..15784)
DNA (939bp) protein (313aa)
F420-dependent oxidoreductase, G6PDH family {ECO:0000313|EMBL:EFH84049.1}; EC=1.5.98.2 {ECO:0000313|EMBL:EFH84049.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales;
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
F420-dependent oxidoreductase, G6PDH family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUI1_9CHLR
13_1_20cm_2_scaffold_1004_19
unknown

Not on your lists

comp(15781..16041)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_20cm_2_scaffold_1004_20
Deinococcus sp. RL, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

16070..16606
DNA (537bp) protein (179aa)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region n=1 Tax=uncultured archaeon A07HR67 RepID=V4XY67_9ARCH
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:KEF34958.1}; TaxID=1489678 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus
birA bifunctional protein
13_1_20cm_2_scaffold_1004_21
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(16593..17324)
DNA (732bp) protein (244aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=565033 specie
NAD-dependent protein deacylase 2 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=NPD2_ARCFU
transcriptional regulatory protein, Sir2 family
Displaying 21 items

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