ggKbase home page

13_1_20cm_2_scaffold_4300

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4300_1
unknown

Not on your lists

comp(1..171)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_2_scaffold_4300_2
unknown

Not on your lists

comp(532..834)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_20cm_2_scaffold_4300_3

Not on your lists

1349..2002
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K376_DEHLB
Marine sediment metagenome DNA, contig: S06H3_S05002 {ECO:0000313|EMBL:GAI31494.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_20cm_2_scaffold_4300_4
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

2052..3704
DNA (1653bp) protein (551aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=CSP1_4_Chloroflexi
CTP synthase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=PYRG_HERA2 rbh
pyrG; CTP synthetase
13_1_20cm_2_scaffold_4300_5
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3710..4621
DNA (912bp) protein (304aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=2 Tax=Thermobifida fusca RepID=Q47SR5_THEFY
Tax=BJP_IG2158_Thermincola_46_17
13_1_20cm_2_scaffold_4300_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4729..5613
DNA (885bp) protein (295aa)
Peptidase M50 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Q2_SPHTD
Peptidase M50 {ECO:0000313|EMBL:ACZ38869.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaero
peptidase M50
13_1_20cm_2_scaffold_4300_7
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


5634..5843
DNA (210bp) protein (70aa)
50S ribosomal protein L31 n=5 Tax=Thermoanaerobacter RepID=RL31_THEP3
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Therm
rpmE; 50S ribosomal protein L31
13_1_20cm_2_scaffold_4300_8
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5949..6950
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I6L3_DESAP
Uncharacterized protein {ECO:0000313|EMBL:ACA60642.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviato
hypothetical protein
13_1_20cm_2_scaffold_4300_9
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6950..8029
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RF1_MOOTA
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoa
prfA; peptide chain release factor 1
13_1_20cm_2_scaffold_4300_10
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8026..8862
DNA (837bp) protein (279aa)
protein-(glutamine-N5) methyltransferase (EC:2.1.1.72)
Release factor glutamine methyltransferase n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B642_DESCC
Putative N(5)-glutamine methyltransferase PrmC {ECO:0000313|EMBL:AKF06220.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandarac
13_1_20cm_2_scaffold_4300_11
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

8853..9434
DNA (582bp) protein (194aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LRA1_TEPAE
Sua5/YciO/YrdC/YwlC family protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
13_1_20cm_2_scaffold_4300_12
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

9504..10778
DNA (1275bp) protein (425aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ARU9_9FIRM
13_1_20cm_2_scaffold_4300_13
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10771..11889
DNA (1119bp) protein (373aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y5E4_9FIRM
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:EHQ90394.1}; Flags: Precursor;; TaxID=768710 species="Bacteria; Firmicutes; Clostr
UDP-phosphate N-acetylglucosaminyltransferase
13_1_20cm_2_scaffold_4300_14
Segniliparus rugosus, Segniliparus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11904..12116
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XLJ1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFV14764.2}; TaxID=679197 species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rugosus ATCC BAA-974.;"
hypothetical protein
13_1_20cm_2_scaffold_4300_15
unknown

Not on your lists

12128..12454
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_20cm_2_scaffold_4300_16

Not on your lists

12451..13209
DNA (759bp) protein (253aa)
ATPase, F0 complex, subunit A {ECO:0000313|EMBL:EQD47783.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EQD47783.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagen
ATPase, F0 complex, subunit A (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZSX3_9ZZZZ
ATP synthase F0 subunit A
13_1_20cm_2_scaffold_4300_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13220..13459
DNA (240bp) protein (80aa)
ATP synthase subunit c n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ64_PSEUX
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
ATP synthase subunit c
13_1_20cm_2_scaffold_4300_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

13456..14028
DNA (573bp) protein (191aa)
atpF; ATP synthase F0 subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7R4_9BACT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:
13_1_20cm_2_scaffold_4300_19
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14105..14368
DNA (264bp) protein (88aa)
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
Displaying 19 items

View Taxonomy