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13_1_20cm_2_scaffold_564

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_564_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19..1218)
DNA (1200bp) protein (400aa)
CoA transferase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026288CE
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-carnitine dehydratase/bile acid-inducible protein F
13_1_20cm_2_scaffold_564_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1215..1682)
DNA (468bp) protein (156aa)
MaoC-like dehydratase (EC:2.3.1.19)
MaoC-like dehydratase n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BSC1_PUNMI
acyl dehydratase MaoC Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_564_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1660..2382)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002DF42AB
Dehydrogenase {ECO:0000313|EMBL:ACG78964.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucine
dehydrogenase
13_1_20cm_2_scaffold_564_4
Porphyromonas asaccharolytica, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2414..2665)
DNA (252bp) protein (84aa)
Methylmalonyl-CoA epimerase n=2 Tax=Porphyromonas asaccharolytica RepID=F4KLA3_PORAD
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:AEE12077.1}; TaxID=879243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas asaccha
methylmalonyl-CoA epimerase
13_1_20cm_2_scaffold_564_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2947..3726
DNA (780bp) protein (260aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA24659.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA24659.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX28_PSEUX
13_1_20cm_2_scaffold_564_6
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4303..5130)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YT66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD52205.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
13_1_20cm_2_scaffold_564_7
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5127..5585)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003478EDE
Putative alkylhydroperoxidase {ECO:0000313|EMBL:GAN50459.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylo
hypothetical protein
13_1_20cm_2_scaffold_564_8
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(5660..6628)
DNA (969bp) protein (323aa)
Amidohydrolase family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0M4_THERP
Amidohydrolase family {ECO:0000313|EMBL:ACM06234.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC
amidohydrolase family protein
13_1_20cm_2_scaffold_564_9
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(6649..7122)
DNA (474bp) protein (158aa)
Aldehyde oxidase small subunit n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYN1_THERP
Aldehyde oxidase small subunit {ECO:0000313|EMBL:ACM04714.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (str
aldehyde oxidase small subunit
13_1_20cm_2_scaffold_564_10
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7122..7997)
DNA (876bp) protein (292aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGE1_THEM7
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ADU51593.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermae
molybdopterin dehydrogenase FAD-binding protein
13_1_20cm_2_scaffold_564_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7994..10300)
DNA (2307bp) protein (769aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUV4_RUBXD
13_1_20cm_2_scaffold_564_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10297..11028)
DNA (732bp) protein (244aa)
Transcriptional regulator, GntR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAN4_CONWI
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB51197.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
GntR family transcriptional regulator
13_1_20cm_2_scaffold_564_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11114..13435
DNA (2322bp) protein (774aa)
carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) (EC:1.2.99.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
carbon monoxide dehydrogenase large subunit n=1 Tax=Rhodococcus opacus RepID=UPI00029CAF79 rbh
Carbon monoxide dehydrogenase large chain
13_1_20cm_2_scaffold_564_14
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13696..14481)
DNA (786bp) protein (262aa)
Putative integral membrane transporter n=1 Tax=Streptomyces sp. Tu6071 RepID=F3ZMP4_9ACTO
Putative integral membrane transporter {ECO:0000313|EMBL:EGJ78335.1}; TaxID=355249 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu60
13_1_20cm_2_scaffold_564_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14529..15413)
DNA (885bp) protein (295aa)
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CEL15841.1}; EC=3.8.1.5 {ECO:0000313|EMBL:CEL15841.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporan
Alpha/beta hydrolase fold n=2 Tax=Saccharopolyspora erythraea RepID=A4FGW0_SACEN rbh
alpha/beta hydrolase
13_1_20cm_2_scaffold_564_16
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15443..17044
DNA (1602bp) protein (534aa)
AMP-dependent synthetase and ligase n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FGW8_SACEN rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CAM03293.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora
AMP-dependent synthetase/ligase
13_1_20cm_2_scaffold_564_17
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17037..17636)
DNA (600bp) protein (200aa)
Putative aminomethyltransferase protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EII5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:AJY73895.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
hypothetical protein
13_1_20cm_2_scaffold_564_18
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17636..18433)
DNA (798bp) protein (266aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CEL15848.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CEL15848.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUW2_RUBXD rbh
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_564_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18438..19091)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RDS7_MYCPH
hypothetical protein; K09967 hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_1_20cm_2_scaffold_564_20
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19103..19894)
DNA (792bp) protein (264aa)
ABC transporter-like protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0URK1_MYCVA
ABC transporter-like protein {ECO:0000313|EMBL:EJZ05248.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 259
Fe(3+)-transporting ATPase
13_1_20cm_2_scaffold_564_21
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19875..20645)
DNA (771bp) protein (257aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Thermobifida fusca (strain YX) RepID=Q47QP7_THEFY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIH97355.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" s
branched-chain amino acid transport system ATP-binding protein
13_1_20cm_2_scaffold_564_22
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20596..21570)
DNA (975bp) protein (325aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UEB8_MYCVA
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:KJE76491.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobi
inner-membrane translocator
13_1_20cm_2_scaffold_564_23
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21567..22385)
DNA (819bp) protein (273aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UJT1_MYCVA
Inner-membrane translocator {ECO:0000313|EMBL:EJZ05245.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 2595
natD; ABC-type netural amino acid transport system permease protein NatD
13_1_20cm_2_scaffold_564_24
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(22461..23762)
DNA (1302bp) protein (434aa)
Extracellular ligand-binding receptor n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V2K5_MYCVA
Receptor family ligand binding region {ECO:0000313|EMBL:KJE76489.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Fer
extracellular ligand-binding receptor
13_1_20cm_2_scaffold_564_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23818..24219
DNA (402bp) protein (134aa)
Endoribonuclease L-PSP n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLV5_PSEUX
endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
endoribonuclease L-PSP
13_1_20cm_2_scaffold_564_26
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24326..24898
DNA (573bp) protein (191aa)
Cyclase family protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGD2_THEM7
Cyclase family protein {ECO:0000313|EMBL:ADU51584.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Therm
cyclase family protein
Displaying 26 items

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