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13_1_20cm_2_scaffold_175

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_175_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

2..310
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATA9_RUBXD
Uncharacterized protein {ECO:0000313|EMBL:ABG05369.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
hypothetical protein
13_1_20cm_2_scaffold_175_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

343..1515
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381A5FA
endoribonuclease L-PSP Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
endoribonuclease L-PSP
13_1_20cm_2_scaffold_175_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1596..3191)
DNA (1596bp) protein (532aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Putative oxidoreductase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X343_9BACT rbh
13_1_20cm_2_scaffold_175_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3419..3988)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025P2_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_2_scaffold_175_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4049..5032
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037886B5
radical SAM protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
radical SAM protein
13_1_20cm_2_scaffold_175_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5112..6080
DNA (969bp) protein (323aa)
Radical SAM superfamily n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDD8_CHLTF rbh
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
radical SAM protein
13_1_20cm_2_scaffold_175_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6213..7121)
DNA (909bp) protein (303aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein n=1 Tax=uncultured bacterium CSLG7 RepID=G4WV40_9BACT
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein
13_1_20cm_2_scaffold_175_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7245..9596)
DNA (2352bp) protein (784aa)
Putative TonB-dependent receptor n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHT3_9BACT
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
TonB-dependent receptor
13_1_20cm_2_scaffold_175_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9664..11652)
DNA (1989bp) protein (663aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025P1_SOLUE rbh
13_1_20cm_2_scaffold_175_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11674..12912
DNA (1239bp) protein (413aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DB3_SOLUE
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
amidohydrolase
13_1_20cm_2_scaffold_175_11
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13105..13557
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R7P9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX65068.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
kinase
13_1_20cm_2_scaffold_175_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13615..13881)
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_20cm_2_scaffold_175_13
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14239..15219
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003647DD0
Uncharacterized protein {ECO:0000313|EMBL:CDH47578.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
extracellular repeat-containing protein, HAF family
13_1_20cm_2_scaffold_175_14
unknown

Not on your lists

comp(15059..15394)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_2_scaffold_175_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15611..16354)
DNA (744bp) protein (248aa)
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Pseudouridine synthase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HKC7_9SPHN
rluD; ribosomal large subunit pseudouridine synthase D
13_1_20cm_2_scaffold_175_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(16474..17205)
DNA (732bp) protein (244aa)
PHP domain-containing protein; K07053 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
transmembrane_regions alias=gwf2_scaffold_1238_10 id=5096035 tax=PER_GWF2_38_31 organism_desc=RuBisCO project
PHP domain-containing protein
13_1_20cm_2_scaffold_175_17
unknown

Not on your lists

comp(17341..17763)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_20cm_2_scaffold_175_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17789..19075)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CCF9_9PLAN
signal peptide-domain containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_20cm_2_scaffold_175_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(20051..23755)
DNA (3705bp) protein (1235aa)
DNA polymerase III, alpha subunit; K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Error-prone DNA polymerase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWN1_SORCE rbh
hypothetical protein
13_1_20cm_2_scaffold_175_20
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(23773..24270)
DNA (498bp) protein (166aa)
DNA damage-inducible protein DinB n=1 Tax=Schlesneria paludicola RepID=UPI00029A74B2
hypothetical protein Tax=RBG_13_OP8X_37_8_curated
DinB family protein
13_1_20cm_2_scaffold_175_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(24284..26101)
DNA (1818bp) protein (606aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QX1_SOLUE
DNA repair nucleotidyltransferase/DNA polymerase-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
DNA repair nucleotidyltransferase/DNA polymerase-like protein
13_1_20cm_2_scaffold_175_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(26067..27038)
DNA (972bp) protein (324aa)
RecA domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QX0_SOLUE
recombinase A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
recombinase A
13_1_20cm_2_scaffold_175_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

27256..28476
DNA (1221bp) protein (407aa)
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026B2_SOLUE rbh
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
major facilitator transporter
13_1_20cm_2_scaffold_175_24
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

28479..29531
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X342_9BACT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AAP58522.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Putative xylanase/chitin deacetylase
13_1_20cm_2_scaffold_175_25
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(29557..30249)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P2S9_DESSD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_20cm_2_scaffold_175_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(30221..30631)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI0003822A98
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_2_scaffold_175_27

Not on your lists

comp(31168..32136)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_009G21 RepID=B3T1B0_9ZZZZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06369.1}; TaxID=455515 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009G21.;"
hypothetical protein
13_1_20cm_2_scaffold_175_28
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(32237..32968)
DNA (732bp) protein (244aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Pseudomonas sp. K-62 RepID=I2FFY7_9PSED
YVTN beta-propeller repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
YVTN beta-propeller repeat-containing protein
Displaying 28 items

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