ggKbase home page

13_1_20cm_2_scaffold_2612

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2612_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(157..420)
DNA (264bp) protein (88aa)
Heat shock protein, Hsp20 family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1A2_ACIC5
heat shock protein, Hsp20 family; K13993 HSP20 family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
heat shock protein, Hsp20 family
13_1_20cm_2_scaffold_2612_2
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(513..833)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000379127F
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_20cm_2_scaffold_2612_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

1030..1908
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036A4602
XRE family transcriptional regulator Tax=CSP1_5_NC10
XRE family transcriptional regulator
13_1_20cm_2_scaffold_2612_4
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2023..2466)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003701EF0
MerR family transcriptional regulator {ECO:0000313|EMBL:KJK59385.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp.
DNA binding domain-containing protein
13_1_20cm_2_scaffold_2612_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2605..3195)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 270 RepID=E3T6U1_9BACT
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_2612_6
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3335..4690)
DNA (1356bp) protein (452aa)
Glr3517 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFK8_GLOVI
amidohydrolase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
13_1_20cm_2_scaffold_2612_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4779..4994
DNA (216bp) protein (72aa)
serine/threonine protein kinase related protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_2612_8
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4973..5500)
DNA (528bp) protein (176aa)
Methyltransferase type 11 n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XGD1_9CHRO
Methyltransferase type 11 {ECO:0000313|EMBL:AFZ31096.1}; Flags: Precursor;; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. P
Methyltransferase type 11
13_1_20cm_2_scaffold_2612_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(5497..7083)
DNA (1587bp) protein (529aa)
Pyrrolo-quinoline quinone n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XS9_SOLUE
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ85536.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
pyrrolo-quinoline quinone
13_1_20cm_2_scaffold_2612_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(7080..7880)
DNA (801bp) protein (267aa)
Putative heme-binding protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XT0_SOLUE
Putative heme-binding protein {ECO:0000313|EMBL:ABJ85535.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
heme-binding protein
13_1_20cm_2_scaffold_2612_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7944..9179
DNA (1236bp) protein (412aa)
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XU3_SOLUE rbh
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
major facilitator transporter
13_1_20cm_2_scaffold_2612_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9306..11690)
DNA (2385bp) protein (795aa)
Macrolide transporter ATP-binding /permease protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QSA7_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
macrolide transporter ATP-binding/permease protein
13_1_20cm_2_scaffold_2612_13
unknown

Not on your lists

12316..12594
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_2_scaffold_2612_14
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12557..13123)
DNA (567bp) protein (189aa)
Glycosyl transferase possibly involved in lipopolysaccharide synthesis n=1 Tax=Beggiatoa alba B18LD RepID=I3CC80_9GAMM
Glycosyl transferase possibly involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:EIJ41223.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae
sugar transferase
13_1_20cm_2_scaffold_2612_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13179..14723
DNA (1545bp) protein (515aa)
Cobalamin B12-binding domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NRF8_GRAMM rbh
cobalamin B12-binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
cobalamin B12-binding domain-containing protein
13_1_20cm_2_scaffold_2612_16
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14819..15940)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN11_9SPHN rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65459.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
hypothetical protein
13_1_20cm_2_scaffold_2612_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16051..16458)
DNA (408bp) protein (136aa)
quinoprotein glucose dehydrogenase; K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Quinoprotein glucose dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL53_9SPHN
quinoprotein glucose dehydrogenase
13_1_20cm_2_scaffold_2612_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16398..17909)
DNA (1512bp) protein (504aa)
quinoprotein glucose dehydrogenase; K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Glucose dehydrogenase n=1 Tax=uncultured Oceanospirillales bacterium HF4000_23O15 RepID=E0XW05_9GAMM
quinoprotein glucose dehydrogenase
Displaying 18 items

View Taxonomy