ggKbase home page

13_1_20cm_2_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 67 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_106_1
unknown

Not on your lists

2..259
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_2_scaffold_106_2
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

294..1067
DNA (774bp) protein (258aa)
Daunorubicin resistance ABC transporter ATP-binding protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WWX2_9EURY
putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_13_Chloroflexi_50_21_curated
ABC transporter-like protein
13_1_20cm_2_scaffold_106_3
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

1039..2370
DNA (1332bp) protein (444aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
atm:ANT_09930 hypothetical protein alias=RBG9_12_96,RBG9_C00012G00096 id=1244900 tax=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi
hypothetical protein
13_1_20cm_2_scaffold_106_4
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2371..2844)
DNA (474bp) protein (158aa)
phage tail protein n=1 Tax=Kaistia granuli RepID=UPI000366F9B8
Uncharacterized protein {ECO:0000313|EMBL:EPE96743.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
conserved hypothetical phage tail region family protein
13_1_20cm_2_scaffold_106_5
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2825..4120)
DNA (1296bp) protein (432aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJS4_MOOTA
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67931.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
hypothetical protein
13_1_20cm_2_scaffold_106_6
unknown

Not on your lists

4329..4802
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_20cm_2_scaffold_106_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4803..5258
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKT2_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AGP33164.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
hypothetical protein
13_1_20cm_2_scaffold_106_8
unknown

Not on your lists

comp(5358..5816)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_20cm_2_scaffold_106_9
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5938..6624
DNA (687bp) protein (229aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WV02_ALIAD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACV57991.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillu
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_106_10
unknown

Not on your lists

comp(6827..7396)
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_20cm_2_scaffold_106_11
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7434..8153)
DNA (720bp) protein (240aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B0H4_9RHOB
13_1_20cm_2_scaffold_106_12
Synechococcus sp. RCC307, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8191..8682)
DNA (492bp) protein (164aa)
UPF0234 protein SynRCC307_1657 n=1 Tax=Synechococcus sp. (strain RCC307) RepID=A5GUK1_SYNR3
UPF0234 protein SynRCC307_1657 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=316278 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strai
putative nucleotide-binding protein
13_1_20cm_2_scaffold_106_13
unknown

Not on your lists

comp(8675..9052)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_20cm_2_scaffold_106_14
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9084..10079
DNA (996bp) protein (332aa)
Branched-chain amino acid aminotransferase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B865_HERA2 rbh
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ABX05998.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Her
branched-chain amino acid aminotransferase
13_1_20cm_2_scaffold_106_15
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10220..11308
DNA (1089bp) protein (363aa)
Glycerate kinase {ECO:0000313|EMBL:EAX46519.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EAX46519.1};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;"
Glycerate kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTZ8_9FIRM
glycerate kinase
13_1_20cm_2_scaffold_106_16
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

11305..12072
DNA (768bp) protein (256aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KDW1_9FIRM
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_13_Chloroflexi_68_17_curated
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_2_scaffold_106_17
unknown

Not on your lists

12069..12656
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_20cm_2_scaffold_106_18
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

12720..13598
DNA (879bp) protein (293aa)
pdxS; pyridoxal biosynthesis lyase PdxS (EC:4.-.-.-) Tax=RBG_13_Chloroflexi_54_9_curated
atm:ANT_01650 pdxS; pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] alias=RBG9_10_29,RBG9_C00010G00029 id=1244770 tax=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi rbh
pyridoxal biosynthesis lyase PdxS
13_1_20cm_2_scaffold_106_19
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13648..14202
DNA (555bp) protein (185aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
Glutamine amidotransferase subunit PdxT n=1 Tax=Streptomyces sp. Tu6071 RepID=F3Z8P4_9ACTO
Glutamine amidotransferase subunit pdxT
13_1_20cm_2_scaffold_106_20
unknown

Not on your lists

14199..15167
DNA (969bp) protein (323aa)

This feature has no annotations

13_1_20cm_2_scaffold_106_21
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

15164..16717
DNA (1554bp) protein (518aa)
Single-stranded nucleic acid binding R3H n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YD94_DICT6
single-stranded nucleic acid binding R3H domain-containing protein Tax=CSP1_3_Armatimonadetes
single-stranded nucleic acid binding R3H
13_1_20cm_2_scaffold_106_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16718..17323
DNA (606bp) protein (202aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacte
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEB1_RHOMR
13_1_20cm_2_scaffold_106_23
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

17367..19757
DNA (2391bp) protein (797aa)
ABC transporter related protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBA4_9CHLR
ABC transporter related protein {ECO:0000313|EMBL:EFO81589.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source
ABC transporter-like protein
13_1_20cm_2_scaffold_106_24
unknown

Not on your lists

19813..20976
DNA (1164bp) protein (388aa)

This feature has no annotations

13_1_20cm_2_scaffold_106_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20989..22119)
DNA (1131bp) protein (377aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Butyryl-CoA dehydrogenase n=1 Tax=Frankia sp. CN3 RepID=G6H2P8_9ACTO
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_2_scaffold_106_26
unknown

Not on your lists

comp(22145..22762)
DNA (618bp) protein (206aa)

This feature has no annotations

13_1_20cm_2_scaffold_106_27
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22773..24383)
DNA (1611bp) protein (537aa)
Drug resistance transporter EmrB/QacA subfamily n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYE3_RUBXD
Drug resistance transporter EmrB/QacA subfamily {ECO:0000313|EMBL:ABG03585.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubr
EmrB/QacA family drug resistance transporter
13_1_20cm_2_scaffold_106_28
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(24380..24838)
DNA (459bp) protein (153aa)
Transcriptional regulator, MarR family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C609_SPHTD
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACZ39561.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaero
transcriptional regulator, MarR family
13_1_20cm_2_scaffold_106_29
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24901..26049)
DNA (1149bp) protein (383aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBM4_CONWI
acyl-CoA dehydrogenase Tax=RBG_13_Deltaproteobacteria_65_10_curated
acyl-CoA dehydrogenase
13_1_20cm_2_scaffold_106_30
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(26059..26970)
DNA (912bp) protein (304aa)
Putative oxidoreductase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYB7_THERP
putative oxidoreductase
Tax=BJP_IG2069_Chloroflexi_70_12
Displaying items 1-30 of 67 in total

View Taxonomy