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13_1_20cm_2_scaffold_1283

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1283_1
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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1..153
DNA (153bp) protein (51aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RBG_13_Euryarchaeota_57_23_curated
methionine sulfoxide reductase B (EC:1.8.4.11)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003652C9A
13_1_20cm_2_scaffold_1283_2
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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comp(155..511)
DNA (357bp) protein (119aa)
D-proline reductase (EC:1.21.4.1) Tax=RBG_16_Chloroflexi_48_8_curated
D-proline reductase (EC:1.21.4.1)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035E44DD
13_1_20cm_2_scaffold_1283_3

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comp(536..1042)
DNA (507bp) protein (169aa)
Proline reductase n=1 Tax=uncultured organism RepID=M1Q217_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKL27182.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
13_1_20cm_2_scaffold_1283_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(1039..1941)
DNA (903bp) protein (301aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9F9_SPHTD
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:ACZ40452.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sph
phenazine biosynthesis protein PhzF family
13_1_20cm_2_scaffold_1283_5
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(1981..2529)
DNA (549bp) protein (183aa)
Lysine exporter protein (LYSE/YGGA) n=2 Tax=Chloroflexus RepID=A9WGV7_CHLAA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ABY36273.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="
lysine exporter protein LysE/YggA
13_1_20cm_2_scaffold_1283_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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2619..3818
DNA (1200bp) protein (400aa)
Putative ABC transporter permease protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RV1_SYMTH
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter permease
13_1_20cm_2_scaffold_1283_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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3823..4521
DNA (699bp) protein (233aa)
Phosphonate-transporting ATPase n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHH2_SPICD
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=GWC2_RIF_CHLX_73_18_curated
phosphonate-transporting ATPase
13_1_20cm_2_scaffold_1283_8
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4546..5403
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003782745
N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:KKD08742.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptom
MmcJ protein
13_1_20cm_2_scaffold_1283_9
unknown

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5541..5969
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_20cm_2_scaffold_1283_10
unknown

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5966..6463
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_20cm_2_scaffold_1283_11
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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6514..7341
DNA (828bp) protein (276aa)
retinol dehydrogenase (EC:1.1.1.105) Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
retinol dehydrogenase (EC:1.1.1.105) alias=RBG9_39_20,RBG9_C00039G00020 id=1245681 tax=RBG9 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi
dehydrogenase
13_1_20cm_2_scaffold_1283_12
unknown

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7399..7833
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_2_scaffold_1283_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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7888..8589
DNA (702bp) protein (234aa)
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQV1_9BACT alias=RBG9_62_15,RBG9_C00062G00015 id=1247317 tax=RBG9 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
winged helix family two component transcriptional regulator Tax=RBG_16_RIF_CHLX_69_14_curated
winged helix family two component transcriptional regulator
13_1_20cm_2_scaffold_1283_14
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8700..9704
DNA (1005bp) protein (335aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3); K07642 two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] Tax=RBG_16_Gammaproteobacteria_66_13_c
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] alias=RBG9_62_16,RBG9_C00062G00016 id=1247318 tax=RBG9 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
13_1_20cm_2_scaffold_1283_15
unknown

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9727..10083
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_20cm_2_scaffold_1283_16
unknown

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comp(10557..10937)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_2_scaffold_1283_17
unknown

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comp(10961..11260)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_20cm_2_scaffold_1283_18
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

11344..11601
DNA (258bp) protein (86aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
13_1_20cm_2_scaffold_1283_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

12127..12804
DNA (678bp) protein (226aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTA3_9CHLR
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EFH83654.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
xylose isomerase domain-containing protein
Displaying 19 items

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