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13_1_20cm_2_scaffold_1444

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1444_1
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..844
DNA (843bp) protein (281aa)
RNA polymerase sigma70 factor n=1 Tax=Rhizobium loti RepID=UPI00035E67E1
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:AID31608.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_2_scaffold_1444_2
unknown

Not on your lists

comp(989..1228)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_2_scaffold_1444_3
R_RIF_OP11_02_39_21, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1481..2068)
DNA (588bp) protein (196aa)
transmembrane_regions 107..129 Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_39_21_curated
transmembrane_regions 107..129 alias=RBG9_59_30,RBG9_C00059G00030 id=1246952 tax=RBG9
13_1_20cm_2_scaffold_1444_4
GWB1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(2065..4608)
DNA (2544bp) protein (848aa)
PE-PGRS FAMILY protein n=23 Tax=Mycobacterium tuberculosis RepID=L0NYE3_MYCTU alias=OP11_1_480 id=5087020 tax=OP11_1 species=Mycobacterium tuberculosis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_desc=Complete genome rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKS84882.1}; TaxID=1618446 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWB1_43_11.;"
glycosyl transferase, family 2
13_1_20cm_2_scaffold_1444_5
unknown

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comp(4649..4855)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_2_scaffold_1444_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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5521..6006
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U3K4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH82994.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_20cm_2_scaffold_1444_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6218..6565
DNA (348bp) protein (116aa)
YCII-related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3P3_VARPE
YCII-related protein {ECO:0000313|EMBL:ADU35823.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (str
ycii-like protein
13_1_20cm_2_scaffold_1444_8
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6562..7830
DNA (1269bp) protein (423aa)
RNA polymerase subunit sigma-24 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHY5_SORCE
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPX63370.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cys
ECF subfamily RNA polymerase sigma factor
13_1_20cm_2_scaffold_1444_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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8078..8725
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LUV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87424.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
thyA; thymidylate synthase ThyA
13_1_20cm_2_scaffold_1444_10
RBG_16_OP11_44_10_curated, Microgenomates, Bacteria

Not on your lists

comp(8737..10023)
DNA (1287bp) protein (429aa)
trehalase-like protein (EC:3.2.1.-); K01238 [EC:3.2.1.-] Tax=RBG_16_OP11_44_10_curated
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WKB1_ACTMD
hypothetical protein
13_1_20cm_2_scaffold_1444_11
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10368..10784)
DNA (417bp) protein (139aa)
Putative cupin domain protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E582_9ACTN
Cupin {ECO:0000313|EMBL:KGN37093.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
cupin 2 barrel domain-containing protein
13_1_20cm_2_scaffold_1444_12
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11221..12051
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00035E8E5C
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:EWM64724.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.
alpha/beta hydrolase fold protein
13_1_20cm_2_scaffold_1444_13
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12132..12614
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003814322
ArsR family transcriptional regulator {ECO:0000313|EMBL:EDY62763.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinae
ArsR family transcriptional regulator
13_1_20cm_2_scaffold_1444_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

12669..13448
DNA (780bp) protein (260aa)
Alpha/beta hydrolase fold protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C982_SPHTD
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACZ40375.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacte
alpha/beta hydrolase fold protein
13_1_20cm_2_scaffold_1444_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(13499..14440)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00036E7B67
alcohol dehydrogenase Tax=RBG_16_Euryarchaeota_67_27_curated
alcohol dehydrogenase
13_1_20cm_2_scaffold_1444_16

Not on your lists

comp(14437..15159)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036676AF
Uncharacterized protein {ECO:0000313|EMBL:EQB63074.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
hypothetical protein
13_1_20cm_2_scaffold_1444_17
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15156..15410)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFN7_NAKMY
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1444_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15485..17785
DNA (2301bp) protein (767aa)
Transcriptional regulator, LuxR family n=1 Tax=Frankia sp. CN3 RepID=G6H2J4_9ACTO rbh
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACV80015.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (
LuxR family transcriptional regulator
13_1_20cm_2_scaffold_1444_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17798..18559
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHU9_RHOM4
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACY48057.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
short-chain dehydrogenase/reductase SDR
Displaying 19 items

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