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13_1_20cm_2_scaffold_176

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_176_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

209..1747
DNA (1539bp) protein (513aa)
Amino acid permease n=1 Tax=Streptomyces sp. AA4 RepID=D9UXV8_9ACTO rbh
amino acid permease Tax=RBG_16_RIF_CHLX_69_14_curated
amino acid permease
13_1_20cm_2_scaffold_176_2
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

1792..4203
DNA (2412bp) protein (804aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003694B9A rbh
glycine cleavage system protein T Tax=CSP1_4_Chloroflexi
glycine cleavage system protein T
13_1_20cm_2_scaffold_176_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(4168..4971)
DNA (804bp) protein (268aa)
Choline/ethanolamine kinase n=1 Tax=Singulisphaera acidiphila DSM 18658 RepID=H1MYS3_9PLAN alias=RBG9_48_8,RBG9_C00048G00008 id=1246409 tax=RBG9 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes
putative choline kinase involved in LPS biosynthesis Tax=CSP1_4_Chloroflexi
putative choline kinase protein
13_1_20cm_2_scaffold_176_4
Thermus sp. CCB_US3_UF1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

5053..6369
DNA (1317bp) protein (439aa)
4-aminobutyrate aminotransferase n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8NDA7_9DEIN rbh
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:AEV16248.1}; TaxID=1111069 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. CCB_US3_UF1.;"
4-aminobutyrate aminotransferase
13_1_20cm_2_scaffold_176_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6366..7811
DNA (1446bp) protein (482aa)
Aminobutyraldehyde dehydrogenase {ECO:0000313|EMBL:ADB49980.1}; EC=1.2.1.19 {ECO:0000313|EMBL:ADB49980.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexi
aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
Aminobutyraldehyde dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F004_CONWI rbh
13_1_20cm_2_scaffold_176_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

8024..8854
DNA (831bp) protein (277aa)
Spermidine/putrescine ABC transporter ATPase n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2WQ82_9PSEU
putative ABC transporter ATP-binding protein Tax=RBG_16_Chloroflexi_63_12_curated
Putative ABC transporter ATP-binding protein YdcT
13_1_20cm_2_scaffold_176_7
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8902..10077
DNA (1176bp) protein (392aa)
transporter n=1 Tax=Acetobacter aceti RepID=UPI00022607F0
Transporter substrate-binding periplasmic protein {ECO:0000313|EMBL:GAN57625.1}; TaxID=887700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; A
ABC transporter binding protein
13_1_20cm_2_scaffold_176_8
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10079..10990
DNA (912bp) protein (304aa)
Binding-protein-dependent transport systems inner membrane component n=10 Tax=Acetobacter pasteurianus RepID=S6CYA6_ACEPA rbh
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:KEZ77512.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaerace
potH; binding-protein-dependent transport systems inner membrane component
13_1_20cm_2_scaffold_176_9
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10994..11800
DNA (807bp) protein (269aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00037D408E
Inner membrane ABC transporter permease protein {ECO:0000313|EMBL:KEZ77511.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.
spermidine/putrescine ABC transporter permease protein
13_1_20cm_2_scaffold_176_10
unknown

Not on your lists

comp(11797..12087)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_20cm_2_scaffold_176_11
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(12093..12758)
DNA (666bp) protein (222aa)
Methyltransferase type 11 n=1 Tax=uncultured bacterium RepID=K2E9I2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW13699.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
Methyltransferase type 11
13_1_20cm_2_scaffold_176_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12860..13279)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003659544
Uncharacterized protein {ECO:0000313|EMBL:ETK36612.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
secreted protein
13_1_20cm_2_scaffold_176_13
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13333..13956)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI000382845E
Uncharacterized protein {ECO:0000313|EMBL:ETK35300.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
13_1_20cm_2_scaffold_176_14
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14042..14452
DNA (411bp) protein (137aa)
MarR family transcriptional regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MH54_CORCM
MarR family transcriptional regulator {ECO:0000313|EMBL:AFE09475.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.
mprA1; MarR family transcriptional regulator
13_1_20cm_2_scaffold_176_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(14459..15670)
DNA (1212bp) protein (404aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCI3_9CHLR rbh
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH90000.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobact
putative ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_2_scaffold_176_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(15672..16025)
DNA (354bp) protein (118aa)
YCII-related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCI2_9CHLR
YCII-related protein {ECO:0000313|EMBL:EFH89999.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemife
DGPF domain-containing protein
13_1_20cm_2_scaffold_176_17
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(16176..16700)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B33A6A
CHRD domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
CHRD domain-containing protein
13_1_20cm_2_scaffold_176_18
unknown

Not on your lists

16719..18101
DNA (1383bp) protein (461aa)

This feature has no annotations

13_1_20cm_2_scaffold_176_19
unknown

Not on your lists

comp(17949..19175)
DNA (1227bp) protein (409aa)

This feature has no annotations

13_1_20cm_2_scaffold_176_20
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19255..20016
DNA (762bp) protein (254aa)
ArsR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B48F28 rbh
SPG23_c9, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28629.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
ArsR family transcriptional regulator
13_1_20cm_2_scaffold_176_21
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20034..20501
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036B32AD
MarR family transcriptional regulator {ECO:0000313|EMBL:EYT82296.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6
hypothetical protein
13_1_20cm_2_scaffold_176_22
unknown

Not on your lists

20745..21299
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_20cm_2_scaffold_176_23
unknown

Not on your lists

comp(21348..21752)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_20cm_2_scaffold_176_24
unknown

Not on your lists

21855..21944
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 24 items

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