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13_1_20cm_2_scaffold_2480

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2480_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2..214
DNA (213bp) protein (71aa)
elongation factor Tu n=2 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B77040
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subd
translation elongation factor Tu
13_1_20cm_2_scaffold_2480_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists


252..581
DNA (330bp) protein (110aa)
30S ribosomal protein S10 n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003695F9A
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
rpsJ; 30S ribosomal protein S10
13_1_20cm_2_scaffold_2480_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


629..1270
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL3_SOLUE
50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L3P
13_1_20cm_2_scaffold_2480_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


1356..2141
DNA (786bp) protein (262aa)
50S ribosomal protein L4 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL4_SOLUE
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
rplD; 50S ribosomal protein L4
13_1_20cm_2_scaffold_2480_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


2145..2441
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL23_KORVE
50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
rplW; 50S ribosomal protein L23
13_1_20cm_2_scaffold_2480_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


2481..3302
DNA (822bp) protein (274aa)
50S ribosomal protein L2 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKI3_DESK7
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L2
13_1_20cm_2_scaffold_2480_7
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists


3693..4037
DNA (345bp) protein (115aa)
30S ribosomal protein S19 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS19_SOLUE
rpsS; ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
rpsS; 30S ribosomal protein S19
13_1_20cm_2_scaffold_2480_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


4041..4553
DNA (513bp) protein (171aa)
50S ribosomal protein L22 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B40D10
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L22
13_1_20cm_2_scaffold_2480_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


4619..5293
DNA (675bp) protein (225aa)
30S ribosomal protein S3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS3_KORVE
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
30S ribosomal protein S3
13_1_20cm_2_scaffold_2480_10
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists


5336..5752
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003774F17
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
rplP; 50S ribosomal protein L16
13_1_20cm_2_scaffold_2480_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


5755..6069
DNA (315bp) protein (105aa)
50S ribosomal protein L29 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISB4_KORVE
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
50S ribosomal protein L29
13_1_20cm_2_scaffold_2480_12
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


6066..6347
DNA (282bp) protein (94aa)
30S ribosomal protein S17 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F633_ACIC5
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source
rpsQ; 30S ribosomal protein S17
13_1_20cm_2_scaffold_2480_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists


6370..6540
DNA (171bp) protein (57aa)
50S ribosomal protein L14 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL14_SOLUE
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
rplN; 50S ribosomal protein L14
13_1_20cm_2_scaffold_2480_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


6674..7027
DNA (354bp) protein (118aa)
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rplX; 50S ribosomal protein L24
13_1_20cm_2_scaffold_2480_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists


7046..7588
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=RL5_GEOUR
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
rplE; 50S ribosomal protein L5
13_1_20cm_2_scaffold_2480_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists


7611..7796
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003822EB2
SSU ribosomal protein S14P; K02954 small subunit ribosomal protein S14 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
30S ribosomal protein S14
13_1_20cm_2_scaffold_2480_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


7807..8205
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E56F9
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
30S ribosomal protein S8
13_1_20cm_2_scaffold_2480_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


8248..8793
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL6_SOLUE
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
rplF; 50S ribosomal protein L6
13_1_20cm_2_scaffold_2480_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


8806..9186
DNA (381bp) protein (127aa)
50S ribosomal protein L18 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL18_SOLUE
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L18
13_1_20cm_2_scaffold_2480_20
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


9190..9768
DNA (579bp) protein (193aa)
30S ribosomal protein S5 n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V7K1_TERSS
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Te
30S ribosomal protein S5
13_1_20cm_2_scaffold_2480_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


9768..9977
DNA (210bp) protein (70aa)
50S ribosomal protein L30 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THC6_9CHLR
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rpmD; ribosomal protein L30/L7E
13_1_20cm_2_scaffold_2480_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


9988..10491
DNA (504bp) protein (168aa)
50S ribosomal protein L15 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKY2_THEM7
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
50S ribosomal protein L15
13_1_20cm_2_scaffold_2480_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


10501..11904
DNA (1404bp) protein (468aa)
Protein translocase subunit SecY n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WB2_SOLUE
protein translocase subunit SecY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
protein translocase subunit SecY/sec61 alpha
13_1_20cm_2_scaffold_2480_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11920..12606
DNA (687bp) protein (229aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
adenylate kinase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B5A716
adenylate kinase
13_1_20cm_2_scaffold_2480_25
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12651..13385
DNA (735bp) protein (245aa)
methionine aminopeptidase, type I; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035ECA88
methionine aminopeptidase
13_1_20cm_2_scaffold_2480_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13401..13670
DNA (270bp) protein (90aa)
Translation initiation factor IF-1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=IF1_KORVE
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
infA; translation initiation factor IF-1
13_1_20cm_2_scaffold_2480_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


13822..14211
DNA (390bp) protein (130aa)
30S ribosomal protein S13 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS13_SOLUE
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rpsM; 30S ribosomal protein S13
13_1_20cm_2_scaffold_2480_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


14272..14718
DNA (447bp) protein (149aa)
30S ribosomal protein S11 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS11_KORVE
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
30S ribosomal protein S11
13_1_20cm_2_scaffold_2480_29
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


14755..15318
DNA (564bp) protein (188aa)
30S ribosomal protein S4 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS4_SOLUE
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
30S ribosomal protein S4
13_1_20cm_2_scaffold_2480_30
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

15470..16498
DNA (1029bp) protein (343aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RPOA_KORVE
DNA-directed RNA polymerase subunit alpha
Displaying items 1-30 of 33 in total

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