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13_1_20cm_2_scaffold_420

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_420_1
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..863)
DNA (861bp) protein (287aa)
Type II and III secretion system protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ52_KORVE
type II/III secretion system protein; K02453 general secretion pathway protein D Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
type II and III secretion system protein
13_1_20cm_2_scaffold_420_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

987..1475
DNA (489bp) protein (163aa)
SsrA-binding protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4B8_ACIC5
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Aci
smpB; SsrA-binding protein
13_1_20cm_2_scaffold_420_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1483..2961
DNA (1479bp) protein (493aa)
Probable cytosol aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; Short=LAP {ECO:0000255|HAMA
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=AMPA_SOLUE
13_1_20cm_2_scaffold_420_4
Prosthecochloris aestuarii, Prosthecochloris, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(3070..3483)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S8T3_PROA2
Uncharacterized protein {ECO:0000313|EMBL:ACF46470.1}; TaxID=290512 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Prosthecochloris.;" source="Prosthecochloris aestuarii (strain
hypothetical protein
13_1_20cm_2_scaffold_420_5
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(3705..5735)
DNA (2031bp) protein (677aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
arginyl-tRNA synthetase (EC:6.1.1.19)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000360B9EF
13_1_20cm_2_scaffold_420_6
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

5970..7193
DNA (1224bp) protein (408aa)
UPF0272 protein CHY_1283 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ACL7_CARHZ rbh
hypothetical protein; K09121 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_20cm_2_scaffold_420_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists


7198..9201
DNA (2004bp) protein (668aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Methionine--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ19_KORVE rbh
methionyl-tRNA synthetase
13_1_20cm_2_scaffold_420_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

9285..10115
DNA (831bp) protein (277aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
TatD-related deoxyribonuclease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ20_KORVE
TatD-related deoxyribonuclease
13_1_20cm_2_scaffold_420_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10167..11114
DNA (948bp) protein (316aa)
geranyltranstransferase (EC:2.5.1.10); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036289DD
trans-hexaprenyltranstransferase
13_1_20cm_2_scaffold_420_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

11137..12093
DNA (957bp) protein (319aa)
Histone deacetylase superfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A43_SOLUE
histone deacetylase superfamily protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
histone deacetylase superfamily protein
13_1_20cm_2_scaffold_420_11
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12112..13107)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WXN8_ACISM
Uncharacterized protein {ECO:0000313|EMBL:ADW68654.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tund
hypothetical protein
13_1_20cm_2_scaffold_420_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(13225..14079)
DNA (855bp) protein (285aa)
ExsB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZH4_SOLUE
exoenzyme S synthesis protein B; K06864 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
exoenzyme S synthesis protein B
13_1_20cm_2_scaffold_420_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14156..15421)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI0003705ABE
surface antigen Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
outer membrane protein assembly complex, YaeT protein
13_1_20cm_2_scaffold_420_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15530..15982)
DNA (453bp) protein (151aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q56_SOLUE
Displaying 14 items

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