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13_1_20cm_2_scaffold_4953

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4953_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

2..235
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F92FB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
late embryogenesis abundant protein
13_1_20cm_2_scaffold_4953_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

296..805
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD4_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_20cm_2_scaffold_4953_3
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(887..2065)
DNA (1179bp) protein (393aa)
mnmA; tRNA-specific 2-thiouridylase MnmA; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003740512
13_1_20cm_2_scaffold_4953_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(2081..3307)
DNA (1227bp) protein (409aa)
iscS1; Cysteine desulfurase (EC:2.8.1.7)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372C035
cysteine desulfurase NifS Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_1_20cm_2_scaffold_4953_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3521..4297)
DNA (777bp) protein (259aa)
Cyclase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTV9_9CHLR
putative cyclase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cyclase family protein
13_1_20cm_2_scaffold_4953_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4436..5071)
DNA (636bp) protein (212aa)
putative phosphonopyruvate decarboxylase; K13039 sulfopyruvate decarboxylase subunit beta [EC:4.1.1.79] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTW0_9CHLR
thiamine pyrophosphate TPP-binding domain-containing protein
13_1_20cm_2_scaffold_4953_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5071..5655)
DNA (585bp) protein (195aa)
Sulfopyruvate decarboxylase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTW1_9CHLR
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:AHG88071.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
thiamine pyrophosphate TPP-binding domain-containing protein
13_1_20cm_2_scaffold_4953_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

5856..7313
DNA (1458bp) protein (486aa)
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:ABJ84912.1}; EC=4.1.1.- {ECO:0000313|EMBL:ABJ84912.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solib
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZK3_SOLUE rbh
13_1_20cm_2_scaffold_4953_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

7591..7800
DNA (210bp) protein (70aa)
Excisionase/Xis, DNA-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRN0_KORVE
excisionase/Xis, DNA-binding Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
excisionase
13_1_20cm_2_scaffold_4953_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

7854..8897
DNA (1044bp) protein (348aa)
Type IV pilus assembly protein PilM n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM9_KORVE
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
type IV pilus assembly protein PilM
13_1_20cm_2_scaffold_4953_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

8900..9559
DNA (660bp) protein (220aa)
Fimbrial assembly protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM8_KORVE
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
fimbrial assembly protein
13_1_20cm_2_scaffold_4953_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9569..10219
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM7_KORVE
hypothetical protein; K02664 type IV pilus assembly protein PilO Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_2_scaffold_4953_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10233..11000
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM6_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_2_scaffold_4953_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10997..12943
DNA (1947bp) protein (649aa)
Type II and III secretion system protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM5_KORVE
type II and III secretion system protein; K02666 type IV pilus assembly protein PilQ Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
type II and III secretion system protein
13_1_20cm_2_scaffold_4953_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

12996..14084
DNA (1089bp) protein (363aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Peptidase M24 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILG0_KORVE
peptidase M24
13_1_20cm_2_scaffold_4953_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14091..14597
DNA (507bp) protein (169aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZFM4_TERRK
Biotin carboxyl carrier protein {ECO:0000313|EMBL:ABF42289.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
biotin carboxyl carrier protein
13_1_20cm_2_scaffold_4953_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14613..15959
DNA (1347bp) protein (449aa)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B5279
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ABF42288.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
acetyl-CoA carboxylase, biotin carboxylase
13_1_20cm_2_scaffold_4953_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15966..16604
DNA (639bp) protein (213aa)
Thiamine-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000255|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000255|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000255|HAMAP-Rule:MF
Thiamine-phosphate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=THIE_KORVE
thiamine-phosphate pyrophosphorylase
13_1_20cm_2_scaffold_4953_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

16615..18168
DNA (1554bp) protein (518aa)
amino acid transporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B54BD9
amino acid permease Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
amino acid permease
13_1_20cm_2_scaffold_4953_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18236..18733
DNA (498bp) protein (166aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILG5_KORVE
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABF42285.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.
amino acid transporter
Displaying 20 items

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