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13_1_20cm_2_scaffold_1741

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1741_1
unknown

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1..513
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_20cm_2_scaffold_1741_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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527..3595
DNA (3069bp) protein (1023aa)
Tetratricopeptide domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5F4_VARPE
Tetratricopeptide domain protein {ECO:0000313|EMBL:ADU34760.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa
hypothetical protein
13_1_20cm_2_scaffold_1741_3
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3670..4800)
DNA (1131bp) protein (377aa)
cysM; cysteine synthase B; K12339 cysteine synthase B [EC:2.5.1.47] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
cysteine synthase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B32090
cysM; cysteine synthase B
13_1_20cm_2_scaffold_1741_4
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4991..5857
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39PY1_GEOMG
Uncharacterized protein {ECO:0000313|EMBL:ABB33693.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallire
hypothetical protein
13_1_20cm_2_scaffold_1741_5
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

comp(6290..7669)
DNA (1380bp) protein (460aa)
Cystathionine beta-synthase n=1 Tax=uncultured Bacteroidetes bacterium RepID=H5SK43_9BACT rbh
Cystathionine beta-synthase {ECO:0000313|EMBL:BAL56529.1}; TaxID=152509 species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
cystathionine beta-synthase
13_1_20cm_2_scaffold_1741_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7686..8582)
DNA (897bp) protein (299aa)
id=12554707 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_20cm_2_scaffold_1741_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8646..9701)
DNA (1056bp) protein (352aa)
Putative Helix-turn-helix, type 11 domain protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKY0_9BACT
transcriptional regulator Tax=RBG_16_Acidobacteria_70_10_curated
Helix-turn-helix, type 11 domain protein
13_1_20cm_2_scaffold_1741_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(9809..10126)
DNA (318bp) protein (106aa)
Cupin 2, conserved barrel n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS53_RUBXD
Cupin 2, conserved barrel {ECO:0000313|EMBL:ABG05775.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubr
cupin 2 barrel domain-containing protein
13_1_20cm_2_scaffold_1741_9
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10138..12462)
DNA (2325bp) protein (775aa)
SMC domain protein n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L6G0_9BACI
SMC domain protein {ECO:0000313|EMBL:EGL83070.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
hypothetical protein
13_1_20cm_2_scaffold_1741_10
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12499..13725)
DNA (1227bp) protein (409aa)
metallophosphoesterase n=1 Tax=Paenibacillus elgii RepID=UPI000248C60E rbh
phosphoesterase Tax=CG_Solirubrobact_01
DNA repair exonuclease
13_1_20cm_2_scaffold_1741_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

13897..14559
DNA (663bp) protein (221aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_20cm_2_scaffold_1741_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

14617..15066
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEQ9_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_20cm_2_scaffold_1741_13
unknown

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15138..16013
DNA (876bp) protein (292aa)

This feature has no annotations

13_1_20cm_2_scaffold_1741_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16098..16919)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003680020
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_20cm_2_scaffold_1741_15
unknown

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16988..17416
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_20cm_2_scaffold_1741_16
unknown

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17619..17894
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_2_scaffold_1741_17
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(17990..19054)
DNA (1065bp) protein (355aa)
Putative integral membrane protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YIC9_THEYD rbh
integral membrane protein Tax=RBG_13_OP8X_37_8_curated
integral membrane protein
13_1_20cm_2_scaffold_1741_18
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(19148..20818)
DNA (1671bp) protein (557aa)
Amidase (EC:3.5.1.4)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LC77_9BACL
amidase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_1_20cm_2_scaffold_1741_19
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20824..22104)
DNA (1281bp) protein (427aa)
MFS transporter n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003681261
Sugar transporter {ECO:0000313|EMBL:AIJ24926.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
ydjE; sugar transporter
13_1_20cm_2_scaffold_1741_20
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

22199..23029
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F67DD
peptidase S16, lon domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
peptidase S16, lon domain-containing protein
13_1_20cm_2_scaffold_1741_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22971..24863)
DNA (1893bp) protein (631aa)
oligoendopeptidase F; K08602 oligoendopeptidase F [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Oligoendopeptidase F n=1 Tax=uncultured bacterium 66 RepID=E3T669_9BACT rbh
hypothetical protein
13_1_20cm_2_scaffold_1741_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25055..25363
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003178BF9
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_20cm_2_scaffold_1741_23
unknown

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25580..25774
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_2_scaffold_1741_24
unknown

Not on your lists

25985..26257
DNA (273bp) protein (91aa)

This feature has no annotations

Displaying 24 items

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