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13_1_20cm_2_scaffold_271

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_271_1
unknown

Not on your lists

143..517
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_20cm_2_scaffold_271_2
GWB1_OP11_41_10, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(633..2387)
DNA (1755bp) protein (585aa)
TPR domain protein n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AKP0_GEOSK
Uncharacterized protein {ECO:0000313|EMBL:KKR85987.1}; TaxID=1618577 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_41_10.;"
hypothetical protein
13_1_20cm_2_scaffold_271_3
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(2390..3058)
DNA (669bp) protein (223aa)
Integral membrane protein TerC n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EG93_9CHLR
Integral membrane protein TerC {ECO:0000313|EMBL:CCF83705.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;"
Integral membrane protein TerC
13_1_20cm_2_scaffold_271_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3150..5399)
DNA (2250bp) protein (750aa)
Amino acid transporters n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023N1_SOLUE
Amino acid transporters {ECO:0000313|EMBL:ABJ83809.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
amino acid transporter
13_1_20cm_2_scaffold_271_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

5547..7814
DNA (2268bp) protein (756aa)
Amino acid transporters n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023N1_SOLUE
Amino acid transporters {ECO:0000313|EMBL:ABJ83809.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
amino acid transporter
13_1_20cm_2_scaffold_271_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(7771..8460)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036D2449 rbh
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
two component transcriptional regulator
13_1_20cm_2_scaffold_271_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(8464..9936)
DNA (1473bp) protein (491aa)
integral membrane sensor signal transduction histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035E85A5
integral membrane sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_271_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9978..10940
DNA (963bp) protein (321aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJZ3_9BACT
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EEF59816.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; P
Zn-dependent oxidoreductase, NADPH:quinone reductase
13_1_20cm_2_scaffold_271_9
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10972..11817
DNA (846bp) protein (282aa)
Hydrolase, carbon-nitrogen family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7L4_ACIC5
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:ACO32822.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum
hydrolase
13_1_20cm_2_scaffold_271_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

11814..12845
DNA (1032bp) protein (344aa)
agmatine deiminase (EC:3.5.3.12) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KXG8_METBM
13_1_20cm_2_scaffold_271_11
unknown

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12848..13372
DNA (525bp) protein (175aa)

This feature has no annotations

13_1_20cm_2_scaffold_271_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13392..14714)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002F798B9 rbh
Major facilitator transporter {ECO:0000313|EMBL:KJC54928.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizob
general substrate transporter
13_1_20cm_2_scaffold_271_13
RLO_PLX_64_10, Bacteria

Not on your lists

14865..15473
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VWU3_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
protein of unknown function DUF820
13_1_20cm_2_scaffold_271_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15501..16397)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A3 RepID=F8TTI9_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_20cm_2_scaffold_271_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(16431..17837)
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
UniRef90_C5EW99 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW99_9FIRM alias=ACD30p_168326.7405.6_3,ACD30p_168326.7405.6G0003,ACD30_C00050G00003 id=36507 tax=ACD30 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11 rbh
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase
13_1_20cm_2_scaffold_271_16
unknown

Not on your lists

17878..18156
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_2_scaffold_271_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18187..18783)
DNA (597bp) protein (199aa)
Amidase (EC:3.5.1.4) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Amidase (EC:3.5.1.4)
Amidase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XNV4_9CHRO
13_1_20cm_2_scaffold_271_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18780..19646)
DNA (867bp) protein (289aa)
Amidase (EC:3.5.1.4) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Amidase (EC:3.5.1.4)
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2IJ85_9PSED
13_1_20cm_2_scaffold_271_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

19800..21371
DNA (1572bp) protein (524aa)
peptidase M28 n=1 Tax=Pontibacter roseus RepID=UPI00037F93A5
aminopeptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
peptidase M28
13_1_20cm_2_scaffold_271_20
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

21387..23378
DNA (1992bp) protein (664aa)
DNA ligase, NAD-dependent; K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=DNLJ_SOLUE
13_1_20cm_2_scaffold_271_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

23350..24375
DNA (1026bp) protein (342aa)
von Willebrand factor, type A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILA5_KORVE
von Willebrand factor, type A {ECO:0000313|EMBL:ABF42345.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
von Willebrand factor A
13_1_20cm_2_scaffold_271_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24415..25617)
DNA (1203bp) protein (401aa)
sgaA; Serine-glyoxylate aminotransferase (SGAT) (EC:2.6.1.45); K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] Ta
Aminotransferase, class V n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXI8_RUBXD
class V aminotransferase
13_1_20cm_2_scaffold_271_23
R_Omnitrophica_44_11, Omnitrophica, Bacteria

Not on your lists

comp(25614..26618)
DNA (1005bp) protein (335aa)
Deoxycytidine monophosphate (dCMP) deaminase required for dCTP and dTTP synthesis; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
hypothetical protein
Putative uncharacterized protein (Fragment) alias=gwa2_scaffold_243_147 id=5043264 tax=GW2011_AR10 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=gwa2_.44_58 (temp) rbh
13_1_20cm_2_scaffold_271_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

26724..27539
DNA (816bp) protein (272aa)
pyrroline-5-carboxylate reductase; K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RBG_16_RIF_WS3X_71_46_curated
Pyrroline-5-carboxylate reductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM0_KORVE alias=16ft_combo_ws3_scaffold_10754_18 id=5223287 tax=16ft_combo_ws3 species=Koribacter versatilis (strain Ellin345) genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria rbh
pyrroline-5-carboxylate reductase
13_1_20cm_2_scaffold_271_25
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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27539..29020
DNA (1482bp) protein (494aa)
glgA; Glycogen synthase; K00703 starch synthase [EC:2.4.1.21] Tax=RBG_16_Zixibacteria_43_9_curated
glgA; Glycogen synthase; K00703 starch synthase [EC:2.4.1.21] alias=RBG1_1309,RBG1_C00001G01309 id=1250867 tax=RBG1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria rbh
glycogen/starch synthase (EC:2.4.1.21)
13_1_20cm_2_scaffold_271_26
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(29218..29604)
DNA (387bp) protein (129aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
13_1_20cm_2_scaffold_271_27
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(29655..31298)
DNA (1644bp) protein (548aa)
Serine phosphatase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027G7_SOLUE
serine phosphatase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
serine phosphatase
13_1_20cm_2_scaffold_271_28
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

31365..33980
DNA (2616bp) protein (872aa)
LmbE family protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFK8_9BACT
LmbE family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
LmbE family protein
Displaying 28 items

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