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13_1_20cm_2_scaffold_286

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_286_1
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

187..492
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:ETK36313.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
13_1_20cm_2_scaffold_286_2
unknown

Not on your lists

658..879
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_2_scaffold_286_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(810..1832)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=uncultured gamma proteobacterium HF4000_48E10 RepID=E7C8S4_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_2_scaffold_286_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1998..3050)
DNA (1053bp) protein (351aa)
peptidase m29 aminopeptidase ii; K01269 aminopeptidase [EC:3.4.11.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_286_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(3047..3787)
DNA (741bp) protein (247aa)
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN39_9BACT
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase {ECO:0000313|EMBL:CBE68141.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidat
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase
13_1_20cm_2_scaffold_286_6
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3771..4709)
DNA (939bp) protein (313aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
Porphobilinogen deaminase n=2 Tax=Geobacter sulfurreducens RepID=HEM3_GEOSL
hemC; hydroxymethylbilane synthase
13_1_20cm_2_scaffold_286_7
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4706..5962)
DNA (1257bp) protein (419aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=GWC2_Pelobacteraceae_58_13_curated
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=HEM1_SOLUE rbh
13_1_20cm_2_scaffold_286_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(5962..6771)
DNA (810bp) protein (270aa)
Cytochrome c-type biogenesis protein CcsB n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M418_GEODF
cytochrome c assembly protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
cytochrome c-type biogenesis protein CcsB
13_1_20cm_2_scaffold_286_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

6834..7511
DNA (678bp) protein (226aa)
M50B family peptidase (EC:3.4.24.-)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI0003620933
Zn-dependent protease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_1_20cm_2_scaffold_286_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

7542..8498
DNA (957bp) protein (319aa)
tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Tryptophan--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJU0_KORVE
tryptophanyl-tRNA synthetase
13_1_20cm_2_scaffold_286_11
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

8505..9254
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000371E370
condensin subunit ScpA; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
chromosome segregation and condensation protein ScpA
13_1_20cm_2_scaffold_286_12
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

9223..9795
DNA (573bp) protein (191aa)
Condensin subunit ScpB n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SF6_SOLUE
condensin subunit ScpB; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
condensin subunit ScpB
13_1_20cm_2_scaffold_286_13
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

9848..10567
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidoba
Pseudouridine synthase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYL7_9BACT
pseudouridine synthase rsuA family protein
13_1_20cm_2_scaffold_286_14
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

10564..11646
DNA (1083bp) protein (361aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=GWC2_Nitrospirae_57_13_curated
Histidinol-phosphate aminotransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RDE5_AMMDK
histidinol-phosphate aminotransferase
13_1_20cm_2_scaffold_286_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

11643..12071
DNA (429bp) protein (143aa)
CoA-binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SF4_SOLUE
CoA-binding domain-containing protein; K06929 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
CoA-binding domain-containing protein
13_1_20cm_2_scaffold_286_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12133..13434)
DNA (1302bp) protein (434aa)
Recombination protein MgsA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IND5_KORVE
Recombination protein MgsA {ECO:0000313|EMBL:ABF41615.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (st
recombination factor protein RarA
13_1_20cm_2_scaffold_286_17

Not on your lists

comp(13587..15638)
DNA (2052bp) protein (684aa)
Glycosyl transferase, family 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BT9_SOLUE
Marine sediment metagenome DNA, contig: S01H1_L03310 {ECO:0000313|EMBL:GAF68879.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
13_1_20cm_2_scaffold_286_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(15671..16504)
DNA (834bp) protein (278aa)
3-demethylubiquinone-9 3-O-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] Tax=RBG_16_RIF_WS3X_71_46
Methyltransferase type 11 n=1 Tax=Frankia sp. CN3 RepID=G6HJZ2_9ACTO alias=16ft_combo_ws3_scaffold_144_10 id=5223769 tax=16ft_combo_ws3 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria
hypothetical protein
13_1_20cm_2_scaffold_286_19
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(16553..17317)
DNA (765bp) protein (255aa)
RNA methyltransferase, TrmH family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3I9_ACIC5
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
TrmH family RNA methyltransferase
13_1_20cm_2_scaffold_286_20
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

17378..18013
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFC4_9BACT
translation factor SUA5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_20cm_2_scaffold_286_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18010..18612
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VH1_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ86344.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
hypothetical protein
13_1_20cm_2_scaffold_286_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

18754..19305
DNA (552bp) protein (184aa)
secreted glycosyl hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_20cm_2_scaffold_286_23
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19342..20850)
DNA (1509bp) protein (503aa)
ABC peptide transporter, periplasmic ligand binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ61_KORVE
ABC peptide transporter, periplasmic ligand binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
peptide ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_286_24
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(20902..21996)
DNA (1095bp) protein (365aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacteri
beta-glucosidase-related glycosidase (EC:3.2.1.52)
Beta-glucosidase-related glycosidase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS2_CHLTF
13_1_20cm_2_scaffold_286_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(22001..24619)
DNA (2619bp) protein (873aa)
DNA mismatch repair protein MutS n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=MUTS_SOLUE
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
DNA mismatch repair protein MutS
13_1_20cm_2_scaffold_286_26
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(24621..25652)
DNA (1032bp) protein (344aa)
6-phosphofructokinase (EC:2.7.1.11) Tax=RBG_16_Planctomycetes_43_13_curated
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7L0Z7_METBM
13_1_20cm_2_scaffold_286_27
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25692..26375
DNA (684bp) protein (228aa)
Peptidase M22, glycoprotease n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJ71_SYNFM
Peptidase M22, glycoprotease {ECO:0000313|EMBL:ABK17473.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="S
peptidase M22, glycoprotease
13_1_20cm_2_scaffold_286_28
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

26347..26823
DNA (477bp) protein (159aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ABB15346.1}; EC=2.3.1.128 {ECO:0000313|EMBL:ABB15346.1};; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003799A42
13_1_20cm_2_scaffold_286_29
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

26891..27133
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BT4_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_20cm_2_scaffold_286_30
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

27234..27836
DNA (603bp) protein (201aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=GWA2_RIF03_38_11_curated
phosphatidylserine decarboxylase (EC:4.1.1.65)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037802E9
Displaying items 1-30 of 37 in total

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