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13_1_20cm_2_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_355_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2..925
DNA (924bp) protein (308aa)
Zn-dependent hydrolases Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_20cm_2_scaffold_355_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

982..2061
DNA (1080bp) protein (360aa)
Histone deacetylase superfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CA3_SOLUE
histone deacetylase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
histone deacetylase superfamily protein
13_1_20cm_2_scaffold_355_3
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2013..2336
DNA (324bp) protein (108aa)
DNA polymerase beta domain protein region n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0N2_THEOJ
hypothetical protein Tax=RBG_16_Betaproteobacteria_56_24_curated
DNA polymerase beta domain-containing protein region
13_1_20cm_2_scaffold_355_4
unknown

Not on your lists

2320..2508
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_2_scaffold_355_5
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2609..3823
DNA (1215bp) protein (405aa)
Putative secreted protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82P58_STRAW
Putative secreted protein {ECO:0000313|EMBL:BAC68785.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain A
protein
13_1_20cm_2_scaffold_355_6
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

3829..4263
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DRZ3_9BACL
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_20cm_2_scaffold_355_7
unknown

Not on your lists

comp(4363..5094)
DNA (732bp) protein (244aa)

This feature has no annotations

13_1_20cm_2_scaffold_355_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5167..5550
DNA (384bp) protein (128aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_20cm_2_scaffold_355_9
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5662..7188
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZLQ0_9PLAN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ82683.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula m
hypothetical protein
13_1_20cm_2_scaffold_355_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

7291..7869
DNA (579bp) protein (193aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_20cm_2_scaffold_355_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

7911..8660
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020W4_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ84525.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
hypothetical protein
13_1_20cm_2_scaffold_355_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8775..10508)
DNA (1734bp) protein (578aa)
Pyrrolo-quinoline quinone n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3U7F6_ADVKW
pyrrolo-quinoline quinone Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
pyrrolo-quinoline quinone
13_1_20cm_2_scaffold_355_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10617..11405
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039E7CDC
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_2_scaffold_355_14
unknown

Not on your lists

comp(11662..12336)
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_20cm_2_scaffold_355_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

12397..13080
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020U6_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ84543.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
13_1_20cm_2_scaffold_355_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

13077..13892
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VV7_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_20cm_2_scaffold_355_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13889..14467
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029S3_SOLUE
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ82203.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" so
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_2_scaffold_355_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(14445..15929)
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI00036B851E
serine/threonin protein kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
serine/threonin protein kinase
13_1_20cm_2_scaffold_355_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15978..16901)
DNA (924bp) protein (308aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHF6_KORVE
thiamine-monophosphate kinase
13_1_20cm_2_scaffold_355_20

Not on your lists

comp(16898..19333)
DNA (2436bp) protein (812aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
lon; ATP-dependent protease La (EC:3.4.21.53)
hypothetical protein n=2 Tax=unclassified Aminicenantes RepID=UPI00036788F1
13_1_20cm_2_scaffold_355_21
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(19401..19763)
DNA (363bp) protein (121aa)
Heat shock protein Hsp20 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJP9_RHOM4
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
heat shock protein Hsp20
13_1_20cm_2_scaffold_355_22

Not on your lists

comp(19770..20228)
DNA (459bp) protein (153aa)
Transcriptional repressor NrdR n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIB9_CHLTF
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1381396 species="Bacteria; environmental samples.;" source="uncultured marine bacterium PPT_M1.;"
transcriptional regulator NrdR
13_1_20cm_2_scaffold_355_23
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(20233..21198)
DNA (966bp) protein (322aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFE2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_20cm_2_scaffold_355_24

Not on your lists

21447..22715
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISW6_KORVE
Uncharacterized protein {ECO:0000313|EMBL:AGT45831.1}; TaxID=1381397 species="Bacteria; environmental samples.;" source="uncultured marine bacterium PPT_M2.;"
hypothetical protein
13_1_20cm_2_scaffold_355_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

22724..23227
DNA (504bp) protein (168aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=AROK_PERMH
13_1_20cm_2_scaffold_355_26
unknown

Not on your lists

23224..23802
DNA (579bp) protein (193aa)

This feature has no annotations

13_1_20cm_2_scaffold_355_27
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

23942..24685
DNA (744bp) protein (248aa)
Cytochrome c biogenesis protein, transmembrane n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVB5_KORVE
cytochrome c biogenesis protein, transmembrane; K06196 cytochrome c-type biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
cytochrome c biogenesis transmembrane protein
13_1_20cm_2_scaffold_355_28
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24692..26608)
DNA (1917bp) protein (639aa)
Putative hydrolase, CocE/NonD family n=1 Tax=Caulobacter sp. AP07 RepID=J2G5N3_9CAUL rbh
Putative hydrolase, CocE/NonD family {ECO:0000313|EMBL:EJL24995.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobac
peptidase S15
13_1_20cm_2_scaffold_355_29
unknown

Not on your lists

26856..26954
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_20cm_2_scaffold_355_30
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(27289..27633)
DNA (345bp) protein (115aa)
anti-sigma factor antagonist n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4FA0F
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain A
anti-anti-sigma factor
Displaying items 1-30 of 40 in total

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