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13_1_20cm_2_scaffold_1083

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1083_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..871)
DNA (870bp) protein (290aa)
UDP-glucose 4-epimerase n=1 Tax=Paenibacillus sp. JC66 RepID=UPI0002898C85
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EHM51431.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
GalE; UDP-glucose 4-epimerase
13_1_20cm_2_scaffold_1083_2
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(868..1614)
DNA (747bp) protein (249aa)
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=GWC2_Deltaproteobacteria_65_14_curated
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003827277
tRNA pseudouridine synthase A
13_1_20cm_2_scaffold_1083_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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1801..3288
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036366FF
Uncharacterized protein {ECO:0000313|EMBL:AEP12519.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
hypothetical protein
13_1_20cm_2_scaffold_1083_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3298..4116)
DNA (819bp) protein (273aa)
ykfA; putative murein peptide carboxypeptidase YkfA (EC:3.4.16.-)
peptidase S66 n=1 Tax=Pseudomonas fluorescens RepID=UPI00037AD078
Peptidase S66 {ECO:0000313|EMBL:EXF91487.1}; TaxID=1042209 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens HK4
13_1_20cm_2_scaffold_1083_5
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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comp(4209..5441)
DNA (1233bp) protein (411aa)
Amidohydrolase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XRW4_9FIRM
metal-dependent amidase/aminoacylase/carboxypeptidase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
amidohydrolase
13_1_20cm_2_scaffold_1083_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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6014..7357
DNA (1344bp) protein (448aa)
Replicative DNA helicase n=1 Tax=Thermincola potens (strain JR) RepID=D5XDQ5_THEPJ
replicative DNA helicase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
replicative DNA helicase
13_1_20cm_2_scaffold_1083_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7354..8523
DNA (1170bp) protein (390aa)
alr; alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=GWD2_Deltaproteobacteria_55_8_curated
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM56_THEM7 rbh
13_1_20cm_2_scaffold_1083_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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8638..9672
DNA (1035bp) protein (345aa)
PilT protein-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVA6_KORVE
PilT protein-like Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
twitching motility protein PilT
13_1_20cm_2_scaffold_1083_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9669..10697
DNA (1029bp) protein (343aa)
TPR repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_2_scaffold_1083_10
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

10694..12223
DNA (1530bp) protein (510aa)
Formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RBG_19FT_COMBO_JS1_35_14_curated
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RA06_AMMDK
Displaying 10 items

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