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13_1_20cm_2_scaffold_2458

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2458_1
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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1..642
DNA (642bp) protein (214aa)
30S ribosomal protein S1 n=1 Tax=Coraliomargarita sp. CAG:312 RepID=R7LBM1_9BACT
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=GWA2_Nitrospirae_42_11_curated
30S ribosomal protein S1
13_1_20cm_2_scaffold_2458_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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707..1039
DNA (333bp) protein (111aa)
Integration host factor, beta subunit, putative n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI39_9BACT
nucleoid DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
nucleoid protein Hbs
13_1_20cm_2_scaffold_2458_3

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1079..1651
DNA (573bp) protein (191aa)
Histidine triad protein n=1 Tax=uncultured prokaryote RepID=H5SL70_9ZZZZ
Histidine triad protein {ECO:0000313|EMBL:BAL56906.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
histidine triad (HIT) protein
13_1_20cm_2_scaffold_2458_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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1701..2981
DNA (1281bp) protein (427aa)
tRNA-I(6)A37 thiotransferase enzyme MiaB n=3 Tax=mine drainage metagenome RepID=T1A1I7_9ZZZZ
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB
13_1_20cm_2_scaffold_2458_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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3034..3519
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFA6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_2_scaffold_2458_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3732..4049
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=uncultured bacterium F39-01 RepID=I3VIC3_9BACT
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:CDM64807.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatog
chromosome partitioning ATPase
13_1_20cm_2_scaffold_2458_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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4019..4411
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=uncultured bacterium F39-01 RepID=I3VIC3_9BACT
chromosome partitioning ATPase; K03496 chromosome partitioning protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
chromosome partitioning ATPase
13_1_20cm_2_scaffold_2458_8
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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4503..5225
DNA (723bp) protein (241aa)
ParB-like partition protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEN8_CHLTF
ParB-like partition protein {ECO:0000313|EMBL:AEP12021.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (
ParB-like partition protein
13_1_20cm_2_scaffold_2458_9

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5439..8129
DNA (2691bp) protein (897aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B506BC
Uncharacterized protein {ECO:0000313|EMBL:KKN07765.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
permease, YjgP/YjgQ family
13_1_20cm_2_scaffold_2458_10
unknown

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comp(8139..9059)
DNA (921bp) protein (307aa)

This feature has no annotations

13_1_20cm_2_scaffold_2458_11
CG_Bacteroid_01, Bacteroidetes, Bacteria

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comp(9056..12154)
DNA (3099bp) protein (1033aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LER8_SYNFM
type I phosphodiesterase/nucleotide pyrophosphatase Tax=CG_Bacteroid_01
type I phosphodiesterase/nucleotide pyrophosphatase
13_1_20cm_2_scaffold_2458_12

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comp(12177..12365)
DNA (189bp) protein (63aa)
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000369F245
Marine sediment metagenome DNA, contig: S01H4_C00192 {ECO:0000313|EMBL:GAG67136.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ahcY; adenosylhomocysteinase
Displaying 12 items

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