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13_1_20cm_2_scaffold_4835

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4835_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

1..1629
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003724527
type I phosphodiesterase/nucleotide pyrophosphatase Tax=RBG_13_OP8X_37_8_curated
hypothetical protein
13_1_20cm_2_scaffold_4835_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1995..2831
DNA (837bp) protein (279aa)
Peptidase M23B n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZW22_DESOH
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
peptidase M23B
13_1_20cm_2_scaffold_4835_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

2846..4018
DNA (1173bp) protein (391aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Carboxyl-terminal protease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIR8_KORVE
carboxyl-terminal protease
13_1_20cm_2_scaffold_4835_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

4387..5628
DNA (1242bp) protein (414aa)
Putative serine/threonine protein kinase (Fragment) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YXM3_9PROT
protein kinase Tax=RBG_16_Acidobacteria_70_10_curated
protein kinase
13_1_20cm_2_scaffold_4835_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

5721..7595
DNA (1875bp) protein (625aa)
Tetratricopeptide repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHP7_KORVE
TPR repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_20cm_2_scaffold_4835_6
unknown

Not on your lists

7670..8401
DNA (732bp) protein (244aa)

This feature has no annotations

13_1_20cm_2_scaffold_4835_7
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8452..9297
DNA (846bp) protein (282aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA7_CHLTF
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=S_Thermoanaerobacterales_50_218
13_1_20cm_2_scaffold_4835_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

9329..9694
DNA (366bp) protein (122aa)
Putative septation protein SpoVG n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=SP5G_ANADF
SpoVG family protein; K06412 stage V sporulation protein G Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
regulatory protein SpoVG
13_1_20cm_2_scaffold_4835_trna_1
unknown

Not on your lists

9722..9792
DNA (71bp)
transferRNA
13_1_20cm_2_scaffold_4835_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

9849..10787
DNA (939bp) protein (313aa)
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WWR3_ACISM
13_1_20cm_2_scaffold_4835_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


10858..11628
DNA (771bp) protein (257aa)
50S ribosomal protein L25 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHW1_KORVE
50S ribosomal protein L25P; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
50S ribosomal protein L25
13_1_20cm_2_scaffold_4835_11
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11652..12245
DNA (594bp) protein (198aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CIP1_SYNLT
13_1_20cm_2_scaffold_4835_12
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12265..12633
DNA (369bp) protein (123aa)
30S ribosomal protein S6 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0S5_9BACT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=556268 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalob
rpsF; 30S ribosomal protein S6
13_1_20cm_2_scaffold_4835_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


12652..12933
DNA (282bp) protein (94aa)
30S ribosomal protein S18 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0S4_9BACT
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
rpsR; 30S ribosomal protein S18
13_1_20cm_2_scaffold_4835_14
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists


12961..13404
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WWR8_ACISM
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RBG_16_RIF03_38_11_curated
50S ribosomal protein L9
13_1_20cm_2_scaffold_4835_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

13409..13885
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C6F72
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein
13_1_20cm_2_scaffold_4835_16
unknown

Not on your lists

13901..14080
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_2_scaffold_4835_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14080..14787
DNA (708bp) protein (236aa)
Thioredoxin {ECO:0000313|EMBL:KIO49232.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
13_1_20cm_2_scaffold_4835_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

14806..15855
DNA (1050bp) protein (350aa)
isocitrate dehydrogenase (EC:1.1.1.41) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK65_SORCE
13_1_20cm_2_scaffold_4835_19
unknown

Not on your lists

comp(16127..16315)
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 20 items

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