ggKbase home page

13_1_20cm_2_scaffold_6493

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_6493_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..1231)
DNA (1230bp) protein (410aa)
(p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
(P)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVC0_KORVE
(p)ppGpp synthetase SpoT/RelA
13_1_20cm_2_scaffold_6493_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1366..2556)
DNA (1191bp) protein (397aa)
Protein-export membrane protein SecF n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9I3_ACIC5
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium cap
secF; protein-export membrane protein SecF
13_1_20cm_2_scaffold_6493_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(2564..4162)
DNA (1599bp) protein (533aa)
Preprotein translocase subunit SecD n=1 Tax=uncultured prokaryote RepID=H5SKX1_9ZZZZ rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aqu
protein-export membrane protein SecD
13_1_20cm_2_scaffold_6493_4
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(4223..4552)
DNA (330bp) protein (110aa)
Protein translocase subunit yajC n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CD44_DESTA
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC Tax=RBG_13_RIF03_48_7_curated
protein translocase subunit yajC
13_1_20cm_2_scaffold_6493_5
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4736..5527
DNA (792bp) protein (264aa)
Multi-copper polyphenol oxidoreductase, laccase n=2 Tax=Odoribacter RepID=F9Z7P5_ODOSD
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (
Multi-copper polyphenol oxidoreductase, laccase
13_1_20cm_2_scaffold_6493_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5687..6088
DNA (402bp) protein (134aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isom
Phosphoheptose isomerase n=1 Tax=Rubrivivax gelatinosus S1 RepID=L8BA76_RUBGE
phosphoheptose isomerase
13_1_20cm_2_scaffold_6493_7
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(6133..7533)
DNA (1401bp) protein (467aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QP60_CYAP0
TPR domain-containing protein Tax=RBG_16_RIF03_38_11_curated
TPR repeat domain-containing protein
13_1_20cm_2_scaffold_6493_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7587..8099)
DNA (513bp) protein (171aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_20cm_2_scaffold_6493_9
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(8096..8671)
DNA (576bp) protein (192aa)
FMN-binding domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVH7_NITHN
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
FMN-binding domain-containing protein
13_1_20cm_2_scaffold_6493_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8671..10101)
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000375C254
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
13_1_20cm_2_scaffold_6493_11
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(10166..11299)
DNA (1134bp) protein (378aa)
ApbE family lipoprotein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W11_SOLUE
hypothetical protein; K03734 thiamine biosynthesis lipoprotein Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
ApbE family lipoprotein
13_1_20cm_2_scaffold_6493_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11464..11970
DNA (507bp) protein (169aa)
Thioesterase superfamily protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H9K0_ANADF
Thioesterase superfamily protein {ECO:0000313|EMBL:ABS25396.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxoba
thioesterase superfamily protein
13_1_20cm_2_scaffold_6493_13

Not on your lists

12080..12487
DNA (408bp) protein (136aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F7E46
Marine sediment metagenome DNA, contig: S03H2_C02263 {ECO:0000313|EMBL:GAH26004.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_20cm_2_scaffold_6493_14
unknown

Not on your lists

12454..12513
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 14 items

View Taxonomy