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13_1_20cm_2_scaffold_4125

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4125_1
unknown

Not on your lists

comp(1..126)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_20cm_2_scaffold_4125_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(177..809)
DNA (633bp) protein (211aa)
Cation/multidrug efflux pump n=1 Tax=uncultured bacterium RepID=K1XNF4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_4125_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

1061..1918
DNA (858bp) protein (286aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_2_scaffold_4125_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1999..2559)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A925_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90866.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function Spy-related protein
13_1_20cm_2_scaffold_4125_5
unknown

Not on your lists

comp(2564..2980)
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_2_scaffold_4125_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2977..3528)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase ECF-type sigma factor
13_1_20cm_2_scaffold_4125_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3663..4262
DNA (600bp) protein (200aa)
TetR-family transcriptional regulator n=1 Tax=uncultured bacterium RepID=Q565X7_9BACT
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
regulatory protein TetR
13_1_20cm_2_scaffold_4125_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4270..5079
DNA (810bp) protein (270aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17) Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1I7_9BACT
13_1_20cm_2_scaffold_4125_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5084..6517
DNA (1434bp) protein (478aa)
Aldehyde Dehydrogenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TM42_9CHLR
DhaS protein Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent aldehyde dehydrogenase
13_1_20cm_2_scaffold_4125_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6544..7017
DNA (474bp) protein (158aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
acetyl-CoA acetyltransferase (EC:2.3.1.174 2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P1U7_9FIRM
13_1_20cm_2_scaffold_4125_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6983..7666
DNA (684bp) protein (228aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Monovalent cation/proton (H+) antiporter subunit D n=1 Tax=Desmospora sp. 8437 RepID=F5SL01_9BACL
13_1_20cm_2_scaffold_4125_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7666..8421
DNA (756bp) protein (252aa)
enoyl-CoA hydratase n=1 Tax=Duganella zoogloeoides RepID=UPI00037ABE1D
enoyl-CoA hydratase/isomerase Tax=RBG_16_Gemmatimonadetes_66_8_curated
phenylacetate degradation, enoyl-CoA hydratase paaB
13_1_20cm_2_scaffold_4125_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8421..9551
DNA (1131bp) protein (377aa)
PhaF protein; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Benzoyl-CoA oxygenase component B n=1 Tax=mine drainage metagenome RepID=E6Q409_9ZZZZ
benzoyl-CoA oxygenase component B
13_1_20cm_2_scaffold_4125_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9548..10243
DNA (696bp) protein (232aa)
glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A928_GEMAT
glycerophosphoryl diester phosphodiesterase family protein
13_1_20cm_2_scaffold_4125_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10240..11088
DNA (849bp) protein (283aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTX8_HALO1
13_1_20cm_2_scaffold_4125_16
unknown

Not on your lists

comp(11098..11205)
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_20cm_2_scaffold_4125_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(11209..11490)
DNA (282bp) protein (94aa)
Caa(3)-type oxidase, subunit IV n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UX5_SOLUE
caa(3)-type oxidase subunit IV Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
caa(3)-type oxidase subunit IV
13_1_20cm_2_scaffold_4125_18
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11537..11734)
DNA (198bp) protein (66aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Cytochrome c oxidase subunit III n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUK5_KORVE
cytochrome c oxidase subunit III
Displaying 18 items

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