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13_1_20cm_2_scaffold_2214

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2214_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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3..1829
DNA (1827bp) protein (609aa)
putative histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase, contains GAF domain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBW7_9BACT rbh
13_1_20cm_2_scaffold_2214_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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1801..3210
DNA (1410bp) protein (470aa)
Sigma-54 dependent transcriptional regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDL1_9BACT
sigma-54 dependent transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
sigma-54 dependent transcriptional regulator
13_1_20cm_2_scaffold_2214_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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3430..4566
DNA (1137bp) protein (379aa)
Putative Response regulator with HD domain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDL0_9BACT rbh
putative response regulator with HD domain Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
putative response regulator with HD domain
13_1_20cm_2_scaffold_2214_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4573..6258)
DNA (1686bp) protein (562aa)
DNA repair protein RecN n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDK9_9BACT rbh
recN; DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
recN; DNA repair protein RecN
13_1_20cm_2_scaffold_2214_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(6285..6632)
DNA (348bp) protein (116aa)
Thioredoxin n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDK8_9BACT
trxA; thioredoxin; K03671 thioredoxin 1 Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
trxA; thioredoxin
13_1_20cm_2_scaffold_2214_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(6775..7332)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDK7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK41316.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_2_scaffold_2214_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7447..9885)
DNA (2439bp) protein (813aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDK6_9BACT rbh
hypothetical protein; K04744 LPS-assembly protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_2214_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9887..11185)
DNA (1299bp) protein (433aa)
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFCSPLOWO2_02_FULL
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
Bifunctional protein FolC: Folylpolyglutamate synthase and Dihydrofolate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDK5_9BACT rbh
13_1_20cm_2_scaffold_2214_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11212..12051)
DNA (840bp) protein (280aa)
accD; acetyl-Coa carboxylase, carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDK3_9BACT rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
13_1_20cm_2_scaffold_2214_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12143..12931)
DNA (789bp) protein (263aa)
Putative cAMP phosphodiesterase, class-II {ECO:0000313|EMBL:CBK41311.1}; EC=3.1.4.- {ECO:0000313|EMBL:CBK41311.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospi
putative cAMP phosphodiesterase, class-II (EC:3.1.4.-)
Putative cAMP phosphodiesterase, class-II n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDK2_9BACT rbh
13_1_20cm_2_scaffold_2214_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13078..13779)
DNA (702bp) protein (234aa)
Putative Nickel/cobalt efflux system RcnA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDK1_9BACT
putative nickel/cobalt efflux system RcnA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative nickel/cobalt efflux system RcnA
13_1_20cm_2_scaffold_2214_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13798..14775)
DNA (978bp) protein (326aa)
Molybdenum cofactor biosynthesis protein A moaA1 n=3 Tax=Mycobacterium tuberculosis RepID=T5H654_MYCTU
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=GWA2_Rokubacteria_70_23_curated
moaA1; molybdenum cofactor biosynthesis protein A
13_1_20cm_2_scaffold_2214_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14921..15550)
DNA (630bp) protein (210aa)
moaE; molybdopterin converting factor large subunit; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Molybdopterin converting factor, large subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDJ9_9BACT
moaE; molybdopterin converting factor large subunit
13_1_20cm_2_scaffold_2214_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(15547..16128)
DNA (582bp) protein (194aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDJ7_9BACT
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=330214 species="Bact
moaC; molybdopterin cofactor biosynthesis protein C
Displaying 14 items

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