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13_1_20cm_2_scaffold_3176

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3176_1
unknown

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comp(3..335)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_20cm_2_scaffold_3176_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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698..2854
DNA (2157bp) protein (719aa)
HEAT repeat protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_3176_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(2894..4024)
DNA (1131bp) protein (377aa)
saccharopine dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
saccharopine dehydrogenase alias=gwa2_scaffold_521_187 id=5044448 tax=GW2011_AR5 species=Thermofilum pendens genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota organism_desc=gwa2_.48_18
saccharopine dehydrogenase
13_1_20cm_2_scaffold_3176_4
unknown

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4406..5179
DNA (774bp) protein (258aa)

This feature has no annotations

13_1_20cm_2_scaffold_3176_5
Streptomyces sp. PAMC26508, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5267..6214)
DNA (948bp) protein (316aa)
formate dehydrogenase chain D (EC:1.2.1.2)
formate dehydrogenase accessory protein FdhD n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00034C1136
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=1265601 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Str
13_1_20cm_2_scaffold_3176_6
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6337..8568)
DNA (2232bp) protein (744aa)
Oxidoreductase alpha (Molybdopterin) subunit n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGB9_THEM7
Oxidoreductase alpha (Molybdopterin) subunit {ECO:0000313|EMBL:ADU51571.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerob
oxidoreductase alpha (molybdopterin) subunit
13_1_20cm_2_scaffold_3176_7
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8623..9957)
DNA (1335bp) protein (445aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; C
FAD dependent oxidoreductase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VMK0_CAUST
FAD dependent oxidoreductase
13_1_20cm_2_scaffold_3176_trna_2
unknown

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comp(10193..10265)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_3176_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10531..11859)
DNA (1329bp) protein (443aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIZ5_9BACT rbh
13_1_20cm_2_scaffold_3176_trna_1
unknown

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12472..12544
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_3176_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12890..14761
DNA (1872bp) protein (624aa)
putative ABC transporter ATPase (EC:3.6.3.-); K06158 ATP-binding cassette, subfamily F, member 3 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative ABC transporter ATPase (EC:3.6.3.-)
Putative ABC-type transport system, ATPase component n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIZ8_9BACT rbh
13_1_20cm_2_scaffold_3176_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14758..15144)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIZ9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_3176_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15225..16526)
DNA (1302bp) protein (434aa)
Replication-associated recombination protein A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ00_9BACT rbh
rarA; replication-associated recombination protein A; K07478 putative ATPase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rarA; replication-associated recombination protein A
13_1_20cm_2_scaffold_3176_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

16680..17486
DNA (807bp) protein (269aa)
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24) Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24)
Putative 3-oxoadipate enol-lactonase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ01_9BACT rbh
13_1_20cm_2_scaffold_3176_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17656..18312)
DNA (657bp) protein (219aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ02_9BACT rbh
13_1_20cm_2_scaffold_3176_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(18324..18581)
DNA (258bp) protein (86aa)
6-pyruvoyl-tetrahydropterin synthase {ECO:0000313|EMBL:CBK43240.1}; EC=4.2.3.12 {ECO:0000313|EMBL:CBK43240.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;
pts; 6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12)
hypothetical protein, partial n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B021
Displaying 16 items

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