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13_1_20cm_2_scaffold_329

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_329_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3..284
DNA (282bp) protein (94aa)
proA; gamma-glutamylphosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
proA; gamma-glutamylphosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGY7_9BACT
13_1_20cm_2_scaffold_329_2
unknown

Not on your lists

comp(334..975)
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_20cm_2_scaffold_329_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2401..2934
DNA (534bp) protein (178aa)
pyrR; bifunctional protein PyrR (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrR; bifunctional protein PyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG60_9BACT
13_1_20cm_2_scaffold_329_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2931..3851
DNA (921bp) protein (307aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG61_9BACT rbh
13_1_20cm_2_scaffold_329_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4065..5186
DNA (1122bp) protein (374aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG62_9BACT rbh
13_1_20cm_2_scaffold_329_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5201..5728
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG63_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_329_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5725..6906
DNA (1182bp) protein (394aa)
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG64_9BACT rbh
13_1_20cm_2_scaffold_329_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6899..7867
DNA (969bp) protein (323aa)
putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative signal peptide peptidase SppA (EC:3.4.21.-)
Putative Signal peptide peptidase SppA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG65_9BACT rbh
13_1_20cm_2_scaffold_329_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7928..8884
DNA (957bp) protein (319aa)
Putative Peptidase M48, Ste24p n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG66_9BACT rbh
Putative Peptidase M48, Ste24p {ECO:0000313|EMBL:CBK42253.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
putative peptidase M48, Ste24p
13_1_20cm_2_scaffold_329_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8897..12148
DNA (3252bp) protein (1084aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116, ECO:0000313|EMBL:CBK42254.1};; TaxID=330214 species="Bacteria; Nitrospi
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG67_9BACT rbh
13_1_20cm_2_scaffold_329_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12730..13509
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG69_9BACT rbh
hypothetical protein; K09134 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_329_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13755..15761)
DNA (2007bp) protein (669aa)
glycosyl hydrolase, glucoamylase (EC:3.2.1.3) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Glycoside hydrolase n=1 Tax=planctomycete KSU-1 RepID=I3IHX2_9PLAN rbh
glycoside hydrolase 15-like protein
13_1_20cm_2_scaffold_329_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15877..17244)
DNA (1368bp) protein (456aa)
bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase (EC:2.6.1.62); K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_cu
bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG72_9BACT rbh
13_1_20cm_2_scaffold_329_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17500..19167
DNA (1668bp) protein (556aa)
Elongation factor 4 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG73_9BACT
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lepA; GTP-binding protein LepA
13_1_20cm_2_scaffold_329_15
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

19170..19955
DNA (786bp) protein (262aa)
lepB; signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG74_9BACT rbh
13_1_20cm_2_scaffold_329_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

19925..20989
DNA (1065bp) protein (355aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-)
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG75_9BACT
13_1_20cm_2_scaffold_329_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

20982..21782
DNA (801bp) protein (267aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG76_9BACT
13_1_20cm_2_scaffold_329_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

21783..23387
DNA (1605bp) protein (535aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG77_9BACT rbh
13_1_20cm_2_scaffold_329_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

23423..24262
DNA (840bp) protein (280aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG78_9BACT rbh
13_1_20cm_2_scaffold_329_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

24259..25218
DNA (960bp) protein (320aa)
Arabinose-5-phosphate isomerase {ECO:0000313|EMBL:CBK42266.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CBK42266.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" sou
kdsD; arabinose-5-phosphate isomerase (EC:5.3.1.13)
Arabinose-5-phosphate isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG79_9BACT rbh
13_1_20cm_2_scaffold_329_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

25258..25878
DNA (621bp) protein (207aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_02_FULL_Ni
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG80_9BACT
13_1_20cm_2_scaffold_329_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

25906..26505
DNA (600bp) protein (200aa)
plsY; hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG81_9BACT
plsY; hypothetical protein
13_1_20cm_2_scaffold_329_23
unknown

Not on your lists

comp(26530..27111)
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_20cm_2_scaffold_329_24
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

27334..27960
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG82_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_329_25
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

27996..29387
DNA (1392bp) protein (464aa)
degP3; serine protease do (EC:3.4.21.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
degP3; serine protease do (EC:3.4.21.-)
Serine protease do n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG83_9BACT
13_1_20cm_2_scaffold_329_26
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(29396..31495)
DNA (2100bp) protein (700aa)
Elongation factor G (EF-G) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG84_9BACT rbh
fusA; elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
fusA; elongation factor G
13_1_20cm_2_scaffold_329_27
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(31530..32219)
DNA (690bp) protein (230aa)
UPF0301 protein NIDE3217 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI23_9BACT
hypothetical protein; K07735 putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_329_28
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(32280..33113)
DNA (834bp) protein (278aa)
DNA repair protein RadC homolog n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG85_9BACT rbh
radC2; DNA repair protein RadC-like protein; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
radC2; DNA repair protein RadC-like protein
13_1_20cm_2_scaffold_329_29
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

33277..33474
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG86_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_329_30
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

33705..34277
DNA (573bp) protein (191aa)
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52)
Putative Ribosomal RNA small subunit methyltransferase D n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG87_9BACT
Displaying items 1-30 of 37 in total

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