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13_1_20cm_2_scaffold_538

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_538_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1..717
DNA (717bp) protein (239aa)
Probable transcriptional regulatory protein NIDE0415 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD3_9BACT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_538_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

813..1421
DNA (609bp) protein (203aa)
ruvA; holliday junction DNA helicase RuvA (EC:3.6.1.-); K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ruvA; holliday junction DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD4_9BACT
13_1_20cm_2_scaffold_538_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

1425..1976
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD5_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_20cm_2_scaffold_538_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2025..3029
DNA (1005bp) protein (335aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016, ECO:0000313|EMBL:CBK40195.1}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=330214 species="Bacteria; Nitros
ruvB; holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD6_9BACT rbh
13_1_20cm_2_scaffold_538_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3217..4299
DNA (1083bp) protein (361aa)
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5); K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=RIFCSPLOWO2_02_FULL_Nitrospi
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
P-protein, bifunctional chorismate mutase/prephenate dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD7_9BACT rbh
13_1_20cm_2_scaffold_538_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4384..5475
DNA (1092bp) protein (364aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD8_9BACT rbh
13_1_20cm_2_scaffold_538_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5485..6498
DNA (1014bp) protein (338aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD9_9BACT
13_1_20cm_2_scaffold_538_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6622..7494
DNA (873bp) protein (291aa)
tyrA; prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tyrA; prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE0_9BACT rbh
13_1_20cm_2_scaffold_538_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7562..8887
DNA (1326bp) protein (442aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE1_9BACT rbh
13_1_20cm_2_scaffold_538_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9202..9582
DNA (381bp) protein (127aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000313|EMBL:CBK40201.1}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate ki
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE2_9BACT
13_1_20cm_2_scaffold_538_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9579..10280
DNA (702bp) protein (234aa)
putative acyltransferase (EC:2.3.-.-); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative acyltransferase (EC:2.3.-.-)
Putative Acyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE3_9BACT
13_1_20cm_2_scaffold_538_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


10338..12068
DNA (1731bp) protein (577aa)
30S ribosomal protein S1 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE4_9BACT rbh
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rpsA; 30S ribosomal protein S1
13_1_20cm_2_scaffold_538_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12084..12980
DNA (897bp) protein (299aa)
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-)
Peptidase S49, putative signal peptide peptidase SppA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE5_9BACT rbh
13_1_20cm_2_scaffold_538_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13074..13352
DNA (279bp) protein (93aa)
Integration host factor, beta subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE6_9BACT
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ihfB; integration host factor subunit beta
13_1_20cm_2_scaffold_538_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13375..14367
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_538_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14478..15074
DNA (597bp) protein (199aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_20cm_2_scaffold_538_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15159..15362)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_538_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15700..16899
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE9_9BACT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_538_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17061..17261
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_538_20
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

17393..17551
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF1_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_20cm_2_scaffold_538_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17631..18518
DNA (888bp) protein (296aa)
putative d-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative d-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF2_9BACT
13_1_20cm_2_scaffold_538_22
Candidatus Poribacteria sp. WGA-A3, Poribacteria, Bacteria

Not on your lists

comp(18523..18972)
DNA (450bp) protein (150aa)
secreted protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AECA
13_1_20cm_2_scaffold_538_23
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(18986..19327)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK40212.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
Displaying 23 items

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