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13_1_20cm_2_scaffold_618

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_618_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


1..1506
DNA (1506bp) protein (502aa)
Signal recognition particle protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN3_9BACT
ffh; signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ffh; signal recognition particle protein
13_1_20cm_2_scaffold_618_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


1701..1907
DNA (207bp) protein (69aa)
30S ribosomal protein S16 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN2_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385, ECO:0000313|EMBL:CBK42769.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus N
rpsP; 30S ribosomal protein S16
13_1_20cm_2_scaffold_618_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1913..2458
DNA (546bp) protein (182aa)
Ribosome maturation factor RimM n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN1_9BACT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Cand
rimM; ribosome maturation factor rimM
13_1_20cm_2_scaffold_618_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2442..3236
DNA (795bp) protein (265aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN0_9BACT rbh
13_1_20cm_2_scaffold_618_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


3241..3684
DNA (444bp) protein (148aa)
50S ribosomal protein L19 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM9_9BACT
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rplS; 50S ribosomal protein L19
13_1_20cm_2_scaffold_618_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3995..4354
DNA (360bp) protein (120aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM8_9BACT
13_1_20cm_2_scaffold_618_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4355..4741
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B193
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_618_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5009..5677
DNA (669bp) protein (223aa)
ftsE; cell division protein FtsE (EC:3.6.3.-); K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ftsE; cell division protein FtsE (EC:3.6.3.-)
Cell division protein FtsE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM6_9BACT rbh
13_1_20cm_2_scaffold_618_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5674..6573
DNA (900bp) protein (300aa)
Cell division protein FtsX n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM5_9BACT rbh
putative cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative cell division protein FtsX
13_1_20cm_2_scaffold_618_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6570..7703
DNA (1134bp) protein (378aa)
Putative Murein hydrolase EnvC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM4_9BACT
Putative Murein hydrolase EnvC {ECO:0000313|EMBL:CBK42761.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
putative murein hydrolase EnvC
13_1_20cm_2_scaffold_618_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7730..9058
DNA (1329bp) protein (443aa)
ctpA; C-terminal-processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ctpA; C-terminal-processing protease (EC:3.4.21.102)
C-terminal-processing protease n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM3_9BACT rbh
13_1_20cm_2_scaffold_618_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9141..9614)
DNA (474bp) protein (158aa)
Putative DNA polymerase IV, family X (N-terminal) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM2_9BACT
putative DNA polymerase IV Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative DNA polymerase IV
13_1_20cm_2_scaffold_618_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9796..10032
DNA (237bp) protein (79aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM0_9BACT
thiS; thiamine biosynthesis protein thiS; K03154 sulfur carrier protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thiS; thiamine biosynthesis protein thiS
13_1_20cm_2_scaffold_618_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10096..10869
DNA (774bp) protein (258aa)
thiazole synthase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B0A9 rbh
thiG; thiazole biosynthesis protein thiG; K03149 thiamine biosynthesis ThiG Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thiG; thiazole biosynthesis protein thiG
13_1_20cm_2_scaffold_618_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10976..11608
DNA (633bp) protein (211aa)
thiE2; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thiE2; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL8_9BACT
13_1_20cm_2_scaffold_618_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11719..13488
DNA (1770bp) protein (590aa)
pan; proteasome-associated ATPase (EC:3.6.-.-); K13527 proteasome-associated ATPase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pan; proteasome-associated ATPase (EC:3.6.-.-)
Proteasome-associated ATPase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL7_9BACT rbh
13_1_20cm_2_scaffold_618_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13545..14681
DNA (1137bp) protein (379aa)
hypothetical protein; K13571 proteasome accessory factor A [EC:6.3.2.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL6_9BACT rbh
hypothetical protein
13_1_20cm_2_scaffold_618_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14651..14950
DNA (300bp) protein (100aa)
hypothetical protein; K13571 proteasome accessory factor A [EC:6.3.2.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL6_9BACT
hypothetical protein
13_1_20cm_2_scaffold_618_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15029..15850
DNA (822bp) protein (274aa)
psmB; proteasome subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
psmB; proteasome subunit beta (EC:3.4.25.1)
Proteasome, beta subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL5_9BACT rbh
13_1_20cm_2_scaffold_618_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15853..16536
DNA (684bp) protein (228aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
psmA; proteasome subunit alpha (EC:3.4.25.1)
Proteasome, alpha subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL4_9BACT
13_1_20cm_2_scaffold_618_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16603..17979
DNA (1377bp) protein (459aa)
hypothetical protein; K13571 proteasome accessory factor A [EC:6.3.2.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL3_9BACT rbh
hypothetical protein
13_1_20cm_2_scaffold_618_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

18039..18914
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_618_23
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

18983..19576
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YC72_9DELT
outer membrane protein Slp; K07285 outer membrane lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_20cm_2_scaffold_618_24
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(19652..21073)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK8_9BACT rbh
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_20cm_2_scaffold_618_25
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(21160..21654)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK7_9BACT
hypothetical protein; K09928 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_618_26
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(21642..22643)
DNA (1002bp) protein (334aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thiL; thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK6_9BACT rbh
13_1_20cm_2_scaffold_618_27
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(22741..25245)
DNA (2505bp) protein (835aa)
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK5_9BACT rbh
13_1_20cm_2_scaffold_618_28
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(25354..26223)
DNA (870bp) protein (290aa)
galU; UTP--glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
galU; UTP--glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK4_9BACT
13_1_20cm_2_scaffold_618_29
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

26583..28886
DNA (2304bp) protein (768aa)
Putative Outer membrane protein assembly factor YaeT n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK3_9BACT
putative outer membrane protein assembly factor YaeT; K07277 outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative outer membrane protein assembly factor YaeT
13_1_20cm_2_scaffold_618_30
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

29045..29623
DNA (579bp) protein (193aa)
Putative Outer membrane chaperone Skp n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK2_9BACT
Putative Outer membrane chaperone Skp {ECO:0000313|EMBL:CBK42739.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
putative outer membrane chaperone Skp
Displaying items 1-30 of 36 in total

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