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13_1_20cm_2_scaffold_998

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_998_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2..847)
DNA (846bp) protein (282aa)
alr; alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGT0_9BACT
13_1_20cm_2_scaffold_998_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(858..1415)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS9_9BACT
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
frr; ribosome recycling factor
13_1_20cm_2_scaffold_998_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1437..2162)
DNA (726bp) protein (242aa)
pyrH; uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS8_9BACT rbh
13_1_20cm_2_scaffold_998_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2159..2764)
DNA (606bp) protein (202aa)
Elongation factor Ts n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS7_9BACT
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tsf; elongation factor Ts
13_1_20cm_2_scaffold_998_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


comp(2813..3610)
DNA (798bp) protein (266aa)
30S ribosomal protein S2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS6_9BACT
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rpsB; 30S ribosomal protein S2
13_1_20cm_2_scaffold_998_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3784..4989)
DNA (1206bp) protein (402aa)
argJ; arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.35 2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Nitrosp
argJ; arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS5_9BACT rbh
13_1_20cm_2_scaffold_998_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5042..6142)
DNA (1101bp) protein (367aa)
argC; n-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
argC; n-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS4_9BACT rbh
13_1_20cm_2_scaffold_998_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


comp(6242..6634)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS3_9BACT
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rpsI; 30S ribosomal protein S9
13_1_20cm_2_scaffold_998_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(6676..7104)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS2_9BACT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus
rplM; 50S ribosomal protein L13
13_1_20cm_2_scaffold_998_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7146..7622)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS1_9BACT
hypothetical protein; K08999 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_998_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7751..8203)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS0_9BACT
hypothetical protein; K08999 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_998_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8344..9042)
DNA (699bp) protein (233aa)
Putative oxoacyl-(Acyl carrier protein) reductase n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JCN3_9PSED
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
short-chain dehydrogenase
13_1_20cm_2_scaffold_998_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9188..9475)
DNA (288bp) protein (96aa)
Putative Fe(2+)-trafficking protein YggX n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR9_9BACT
putative fe(2+)-trafficking protein YggX Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative fe(2+)-trafficking protein YggX
13_1_20cm_2_scaffold_998_14
unknown

Not on your lists

comp(9686..9961)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_2_scaffold_998_trna_1
unknown

Not on your lists

10115..10198
DNA (84bp)
transferRNA
13_1_20cm_2_scaffold_998_15
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

10489..11214
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR8_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_20cm_2_scaffold_998_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11425..11700
DNA (276bp) protein (92aa)
putative sulfurtransferase TusA (EC:2.8.1.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative sulfurtransferase TusA (EC:2.8.1.-)
Putative Sulfurtransferase TusA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR7_9BACT
Displaying 17 items

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