ggKbase home page

13_1_20cm_2_scaffold_1420

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1420_1

Not on your lists

3..545
DNA (543bp) protein (181aa)
UPI0003D7A767 related cluster n=3 Tax=Aminicenantes RepID=UPI0003D7A767
Marine sediment metagenome DNA, contig: S12H4_L00458 {ECO:0000313|EMBL:GAI75834.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_20cm_2_scaffold_1420_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

553..1443
DNA (891bp) protein (297aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V307_TERSS
PBS lyase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PBS lyase HEAT domain-containing protein
13_1_20cm_2_scaffold_1420_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

1577..2584
DNA (1008bp) protein (336aa)
TPR repeat-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZA4_SOLUE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_2_scaffold_1420_4
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

2597..2890
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZER8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92082.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211
13_1_20cm_2_scaffold_1420_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2964..5075)
DNA (2112bp) protein (704aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000373BE7D rbh
polynucleotide phosphorylase
13_1_20cm_2_scaffold_1420_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5175..5444)
DNA (270bp) protein (90aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RBG_16_Anaeromyxobacter_69_14_curated
30S ribosomal protein S15 n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X3U5_ACISM
30S ribosomal protein S15
13_1_20cm_2_scaffold_1420_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(5448..6314)
DNA (867bp) protein (289aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=TRUB_SOLUE
tRNA pseudouridine synthase B
13_1_20cm_2_scaffold_1420_8
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6458..6814)
DNA (357bp) protein (119aa)
Ribosome-binding factor A n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RBFA_HALOH
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; An
rbfA; ribosome-binding factor A
13_1_20cm_2_scaffold_1420_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6818..7102)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W30_SOLUE
hypothetical protein; K09764 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_2_scaffold_1420_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(7134..9788)
DNA (2655bp) protein (885aa)
Translation initiation factor IF-2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=IF2_SOLUE
translation initiation factor 2; K02519 translation initiation factor IF-2 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
translation initiation factor 2
13_1_20cm_2_scaffold_1420_11
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9956..10300)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000378CEBC
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Ter
NusA antitermination factor
Displaying 11 items

View Taxonomy