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13_1_20cm_2_scaffold_1796

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1796_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2..2251
DNA (2250bp) protein (750aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=454194 species="Bacteria; Ac
Transcription-repair-coupling factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV1_KORVE
transcription-repair coupling factor
13_1_20cm_2_scaffold_1796_2
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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2277..3329
DNA (1053bp) protein (351aa)
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X3J0_ACISM
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_20cm_2_scaffold_1796_3
unknown

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comp(3408..3590)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_20cm_2_scaffold_1796_4

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3626..3997
DNA (372bp) protein (124aa)
Transcriptional repressor, CopY family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PU3_SOLUE
MarR family transcriptional regulatory protein {ECO:0000313|EMBL:AGT45809.1}; TaxID=1381397 species="Bacteria; environmental samples.;" source="uncultured marine bacterium PPT_M2.;"
CopY family transcriptional regulator
13_1_20cm_2_scaffold_1796_5
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4142..4894)
DNA (753bp) protein (251aa)
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Geobacter sp. (strain M21) RepID=C6E5H9_GEOSM
uroporphyrin-III C/tetrapyrrole methyltransferase
Tax=BJP_IG2157_Desulfuromonadales_56_134
13_1_20cm_2_scaffold_1796_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(5178..6056)
DNA (879bp) protein (293aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UDP-glucose pyrophosphorylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A85_SOLUE rbh
13_1_20cm_2_scaffold_1796_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6056..6430)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LNL0_9EURY
cupin domain protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cupin 2 conserved barrel domain protein
13_1_20cm_2_scaffold_1796_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(6438..7286)
DNA (849bp) protein (283aa)
lepB; signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_13_Acidobacteria_68_16_curated
lepB; signal peptidase I (EC:3.4.21.89)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037CDB44
13_1_20cm_2_scaffold_1796_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(7287..7733)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035E8E35
Uncharacterized protein {ECO:0000313|EMBL:CDM65781.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_2_scaffold_1796_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(7747..9138)
DNA (1392bp) protein (464aa)
RtcB protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037C6405
hypothetical protein
13_1_20cm_2_scaffold_1796_11
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(9141..9488)
DNA (348bp) protein (116aa)
Protein archease n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12U03_METBU
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
archease family protein
Displaying 11 items

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