ggKbase home page

13_1_20cm_2_scaffold_3021

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3021_1
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(128..586)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037BABC6
Membrane protein {ECO:0000313|EMBL:EOD65774.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.
13_1_20cm_2_scaffold_3021_2
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

934..1890
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F7C10E
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=CG_Ignavi_02
ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_3021_3
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

2008..2781
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H8F0_SALRM
hypothetical protein Tax=RBG_13_Caldithrix_44_9_curated
hypothetical protein
13_1_20cm_2_scaffold_3021_4
unknown

Not on your lists

2784..3713
DNA (930bp) protein (310aa)

This feature has no annotations

13_1_20cm_2_scaffold_3021_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3800..5065)
DNA (1266bp) protein (422aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=234267 specie
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381993F
rho; transcription termination factor Rho
13_1_20cm_2_scaffold_3021_6
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5130..5507)
DNA (378bp) protein (126aa)
GTP-binding protein YsxC n=1 Tax=Brevibacillus panacihumi W25 RepID=V6MDM7_9BACL
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;"
probable GTP-binding protein EngB
13_1_20cm_2_scaffold_3021_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5819..8239)
DNA (2421bp) protein (807aa)
Lon-A peptidase (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Lon protease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRE0_KORVE
Lon-A peptidase
13_1_20cm_2_scaffold_3021_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(8269..9501)
DNA (1233bp) protein (411aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRD9_KORVE
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
clpX; ATP-dependent protease ATP-binding subunit ClpX
13_1_20cm_2_scaffold_3021_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(9559..10164)
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
clpP; ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=CLPP_ACIC5
13_1_20cm_2_scaffold_3021_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10267..11193)
DNA (927bp) protein (309aa)
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; TaxID=204669 spe
Trigger factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=TIG_KORVE
trigger factor
Displaying 10 items

View Taxonomy