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13_1_20cm_2_scaffold_4354

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4354_1
unknown

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comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_20cm_2_scaffold_4354_2
unknown

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176..616
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_20cm_2_scaffold_4354_3
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(588..1571)
DNA (984bp) protein (328aa)
UDP-glucose 4-epimerase n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DGJ5_9GAMM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AHE96948.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
UDP-glucose 4-epimerase
13_1_20cm_2_scaffold_4354_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1568..2476)
DNA (909bp) protein (303aa)
Putative dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:CBK42572.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CBK42572.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.
putative dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
Putative dTDP-glucose 4,6-dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PH35_9BACT
13_1_20cm_2_scaffold_4354_5
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2473..3774)
DNA (1302bp) protein (434aa)
UDP-glucose/GDP-mannose dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=CG_Desulfob_01
Nucleotide sugar dehydrogenase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HKK2_9SPIR rbh
UDP-glucose 6-dehydrogenase
13_1_20cm_2_scaffold_4354_6
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(3777..4076)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZF5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_20cm_2_scaffold_4354_7
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4110..4772)
DNA (663bp) protein (221aa)
3-oxoadipate CoA-succinyl transferase, beta subunit {ECO:0000313|EMBL:ACO33181.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ACO33181.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
dxnH; 3-oxoadipate CoA-succinyl transferase subunit beta (EC:2.8.3.5)
3-oxoadipate CoA-succinyl transferase, beta subunit n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3E0_ACIC5
13_1_20cm_2_scaffold_4354_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(4769..5473)
DNA (705bp) protein (235aa)
3-oxoacid CoA-transferase, subunit A; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
3-oxoacid CoA-transferase, subunit A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISI4_KORVE
succinyl-CoA:3-ketoacid-CoA transferase
13_1_20cm_2_scaffold_4354_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5470..6240)
DNA (771bp) protein (257aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Prephenate dehydrogenase n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KG84_CHLTE
tyrA; prephenate dehydrogenase
13_1_20cm_2_scaffold_4354_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(6780..7805)
DNA (1026bp) protein (342aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:ABJ88779.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ABJ88779.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacteral
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NJ1_SOLUE
13_1_20cm_2_scaffold_4354_11
RLO_RIF05_58_11, RIF5, Bacteria

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comp(7816..8085)
DNA (270bp) protein (90aa)
chorismate mutase (EC:5.4.99.5); K04093 chorismate mutase [EC:5.4.99.5] Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
Chorismate mutase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M267_GEODF
Chorismate mutase
13_1_20cm_2_scaffold_4354_12
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(8082..8774)
DNA (693bp) protein (231aa)
tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
tryptophan synthase subunit alpha (EC:4.2.1.20)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037702E5
Displaying 12 items

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