ggKbase home page

13_1_20cm_2_scaffold_1971

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1971_1
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(2..367)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U7R7_9PLAN
hypothetical protein Tax=RBG_13_Nitrospirae_39_12_curated
hypothetical protein
13_1_20cm_2_scaffold_1971_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(413..1513)
DNA (1101bp) protein (367aa)
KpsF/GutQ family protein {ECO:0000313|EMBL:ABF40061.1}; EC=5.3.1.13 {ECO:0000313|EMBL:ABF40061.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Korib
KpsF/GutQ family protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST9_KORVE
KpsF/GutQ family protein
13_1_20cm_2_scaffold_1971_3
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1637..2449)
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39PY1_GEOMG
Uncharacterized protein {ECO:0000313|EMBL:ABB33693.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallire
hypothetical protein
13_1_20cm_2_scaffold_1971_4
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2430..2711)
DNA (282bp) protein (94aa)
K+ channel, pore region n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJ54_9CHLR
Ion channel {ECO:0000313|EMBL:GAM08623.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein
13_1_20cm_2_scaffold_1971_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2776..3546)
DNA (771bp) protein (257aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000255|HAMAP-Rule:MF_00056}; EC=2.5.1.55 {ECO:0000255|HAMAP-Rule:MF_00056};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000255|HAMAP-Ru
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=KDSA_KORVE rbh
2-dehydro-3-deoxyphosphooctonate aldolase
13_1_20cm_2_scaffold_1971_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3716..5389)
DNA (1674bp) protein (558aa)
CTP synthase {ECO:0000255|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000255|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000255|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000255|HAMAP-Rule:MF_01227};
CTP synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=PYRG_KORVE rbh
pyrG; CTP synthetase
13_1_20cm_2_scaffold_1971_7
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5799..6050
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034AC55B
AbrB family transcriptional regulator {ECO:0000313|EMBL:KIJ77732.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB5
AbrB family transcriptional regulator
13_1_20cm_2_scaffold_1971_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6043..6429
DNA (387bp) protein (129aa)
PilT protein-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHH8_KORVE
PilT protein-like protein {ECO:0000313|EMBL:ABF43672.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (str
twitching motility protein PilT
13_1_20cm_2_scaffold_1971_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6440..7504
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKE1_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF42659.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_2_scaffold_1971_10
unknown

Not on your lists

7729..8298
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_20cm_2_scaffold_1971_11
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(8312..9757)
DNA (1446bp) protein (482aa)
Putative aromatic amino acid decarboxylase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I796_CALAS rbh
putative aromatic amino acid decarboxylase Tax=RBG_16_Chloroflexi_57_11_curated
putative aromatic amino acid decarboxylase
13_1_20cm_2_scaffold_1971_12
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(9877..10641)
DNA (765bp) protein (255aa)
Methyltransferase type 11 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSG5_9BACT
methylase Tax=RBG_16_Chloroflexi_57_11_curated
methylase
13_1_20cm_2_scaffold_1971_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10802..11281
DNA (480bp) protein (160aa)
Putative alkyl hydroperoxide reductase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N239_ANATU
putative alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
putative alkyl hydroperoxide reductase
13_1_20cm_2_scaffold_1971_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11426..11674
DNA (249bp) protein (83aa)
Glutamate carboxypeptidase II {ECO:0000313|EMBL:ABF41467.1}; EC=3.4.17.21 {ECO:0000313|EMBL:ABF41467.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus
Glutamate carboxypeptidase II n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INT3_KORVE
glutamate carboxypeptidase II
Displaying 14 items

View Taxonomy