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13_1_20cm_2_scaffold_333

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_333_1

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comp(2..601)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NME8_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ABV58992.1}; TaxID=470733 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium cosmid p2H8.;"
hypothetical protein
13_1_20cm_2_scaffold_333_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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774..3131
DNA (2358bp) protein (786aa)
Serine/threonine protein kinase with TPR repeats n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISU5_KORVE
TPR repeat-containing serine/threonin protein kinase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
serine/threonin protein kinase
13_1_20cm_2_scaffold_333_3
unknown

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comp(3218..3652)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_2_scaffold_333_4
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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comp(3737..5524)
DNA (1788bp) protein (596aa)
DNA polymerase X family protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP10_KORVE
phosphotransferase domain-containing protein; K02347 DNA polymerase (family X) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
DNA polymerase X family protein
13_1_20cm_2_scaffold_333_5
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6274..7554
DNA (1281bp) protein (427aa)
Outer membrane efflux protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NTE8_GRAMM
Outer membrane efflux protein {ECO:0000313|EMBL:AEU38660.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella
outer membrane efflux protein
13_1_20cm_2_scaffold_333_6

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7579..9153
DNA (1575bp) protein (525aa)
Putative Secretion protein HlyD n=1 Tax=mine drainage metagenome RepID=E6PXV7_9ZZZZ
Putative Secretion protein HlyD {ECO:0000313|EMBL:CBH99766.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RND family efflux transporter MFP subunit
13_1_20cm_2_scaffold_333_7
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9156..12311
DNA (3156bp) protein (1052aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NTF0_GRAMM rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:AEU38662.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (
CzcA family heavy metal efflux pump
13_1_20cm_2_scaffold_333_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(12567..12770)
DNA (204bp) protein (68aa)
Cold-shock DNA-binding protein family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRH5_KORVE
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
cold-shock DNA-binding protein family protein
13_1_20cm_2_scaffold_333_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(12988..13596)
DNA (609bp) protein (203aa)
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
NUDIX hydrolase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P205_GRAMM
NUDIX hydrolase
13_1_20cm_2_scaffold_333_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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13784..14563
DNA (780bp) protein (260aa)
Transcriptional regulator, LytR/AlgR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISZ6_KORVE
Transcriptional regulator, LytR/AlgR family {ECO:0000313|EMBL:ABF40004.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribact
LytR/AlgR family transcriptional regulator
13_1_20cm_2_scaffold_333_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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14865..15623
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XV7_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ85508.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
hypothetical protein
13_1_20cm_2_scaffold_333_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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15768..16640
DNA (873bp) protein (291aa)
HNH endonuclease n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE61_ALIDK
HNH endonuclease Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
HNH endonuclease
13_1_20cm_2_scaffold_333_13
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

16710..17117
DNA (408bp) protein (136aa)
Toxin-antitoxin system, toxin component, RelE family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC91_9ACTN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_20cm_2_scaffold_333_14
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

17114..17413
DNA (300bp) protein (100aa)
Putative transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRD5_SINAD
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
transcriptional regulator
Displaying 14 items

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