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13_1_20cm_2_scaffold_1144

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1144_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

1..162
DNA (162bp) protein (54aa)
glycosyl transferase family 2 protein (EC:2.4.1.-); K00729 dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] Tax=CSP1_6_Rokubacteria
13_1_20cm_2_scaffold_1144_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

159..1313
DNA (1155bp) protein (385aa)
Aminotransferase class I and II n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FLE9_DESAA
aspartate aminotransferase Tax=GWA2_Rokubacteria_73_35_curated
aspartate aminotransferase
13_1_20cm_2_scaffold_1144_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1310..1735
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBV3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_1144_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1741..2460
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MLW3_9SPHN
methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_1144_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2493..4604
DNA (2112bp) protein (704aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CXA5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_1144_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4601..5257
DNA (657bp) protein (219aa)
nth; endonuclease III (EC:4.2.99.18) Tax=CSP1_6_Rokubacteria
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHG5_9BACT
13_1_20cm_2_scaffold_1144_7
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

5269..6447
DNA (1179bp) protein (393aa)
Lipolytic protein G-D-S-L family n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VAE3_9CYAN
G-D-S-L family lipolytic protein Tax=GWA2_Elusimicrobia_69_24_curated
lipolytic protein G-D-S-L family
13_1_20cm_2_scaffold_1144_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


6530..6985
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=1 Tax=Thermincola potens (strain JR) RepID=D5XAB8_THEPJ
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L13
13_1_20cm_2_scaffold_1144_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


6985..7380
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGN9_CHLTF
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
30S ribosomal protein S9
13_1_20cm_2_scaffold_1144_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7397..8446
DNA (1050bp) protein (350aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=GWA2_Rokubacteria_73_35_curated
argC; n-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGS4_9BACT
13_1_20cm_2_scaffold_1144_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8446..9690
DNA (1245bp) protein (415aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_cur
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D505_PELTS
ArgJ; N-acetylglutamate synthase
13_1_20cm_2_scaffold_1144_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


9773..10534
DNA (762bp) protein (254aa)
30S ribosomal protein S2 n=1 Tax=Salimicrobium sp. MJ3 RepID=K2GQW3_9BACI rbh
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=GWA2_Rokubacteria_73_35_curated
rpsB; 30S ribosomal protein S2
13_1_20cm_2_scaffold_1144_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10539..11141
DNA (603bp) protein (201aa)
Elongation factor Ts n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0IA63_CALAS
elongation factor Ts Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
tsf; elongation factor Ts
13_1_20cm_2_scaffold_1144_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11144..11878
DNA (735bp) protein (245aa)
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22] Tax=GWA2_Rokubacteria_73_35_curated
Uridylate kinase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=PYRH_PELCD rbh
pyrH; uridylate kinase
13_1_20cm_2_scaffold_1144_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11903..12466
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXI1_DESFR
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ribosome recycling factor
13_1_20cm_2_scaffold_1144_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12481..13263
DNA (783bp) protein (261aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=GWA2_Rokubacteria_73_35_curated
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WPI2_KYRT2
13_1_20cm_2_scaffold_1144_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13289..14140
DNA (852bp) protein (284aa)
cdsA; phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4U1_9BACT
13_1_20cm_2_scaffold_1144_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14137..15312
DNA (1176bp) protein (392aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIW9_CHLTF
13_1_20cm_2_scaffold_1144_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15309..16676
DNA (1368bp) protein (456aa)
rseP; regulator of sigma E protease (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rseP; regulator of sigma E protease (EC:3.4.24.-)
Peptidase M50 n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4T9_9BACT
13_1_20cm_2_scaffold_1144_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16696..17787
DNA (1092bp) protein (364aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJF6_9BACT
13_1_20cm_2_scaffold_1144_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


18074..19759
DNA (1686bp) protein (562aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJF7_9BACT rbh
13_1_20cm_2_scaffold_1144_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19839..20306
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFC2_DESB2
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_1144_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20319..21620
DNA (1302bp) protein (434aa)
Transcription termination factor NusA n=1 Tax=Thermincola potens (strain JR) RepID=D5XF10_THEPJ
NusA antitermination factor; K02600 N utilization substance protein A Tax=GWA2_Rokubacteria_73_35_curated
transcription termination factor NusA
13_1_20cm_2_scaffold_1144_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21879..24392
DNA (2514bp) protein (838aa)
Translation initiation factor IF-2 n=1 Tax=Thermincola potens (strain JR) RepID=D5XF13_THEPJ
infB; translation initiation factor IF-2 Tax=GWA2_Rokubacteria_73_35_curated
translation initiation factor IF-2
13_1_20cm_2_scaffold_1144_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24414..24704
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKK3_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_1144_26
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

24704..25933
DNA (1230bp) protein (410aa)
Exopolyphosphatase-like enzyme n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PLA2_9FIRM
exopolyphosphatase-related proteins; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
exopolyphosphatase-related proteins
13_1_20cm_2_scaffold_1144_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

25930..26847
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase b; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALSr1 RepID=UPI0003618D9C
tRNA pseudouridine synthase B
13_1_20cm_2_scaffold_1144_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26810..27736
DNA (927bp) protein (309aa)
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=GWA2_Rokubacteria_73_35_curated
Riboflavin biosynthesis protein RibF n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIC6_ROSCS
riboflavin biosynthesis protein RibF
13_1_20cm_2_scaffold_1144_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


27853..28122
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=RS15_GEOUR
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rpsO; 30S ribosomal protein S15
13_1_20cm_2_scaffold_1144_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

28247..30391
DNA (2145bp) protein (715aa)
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKK9_9BACT
Displaying items 1-30 of 45 in total

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