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13_1_20cm_2_scaffold_1754

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1754_1
R_NC10_66_22, NC10, Bacteria

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comp(3..353)
DNA (351bp) protein (117aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Clostridium sp. JC122 RepID=UPI00028861BB
spermidine/putrescine ABC transporter permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
potC; spermidine/putrescine transport protein (ABC superfamily, membrane)
13_1_20cm_2_scaffold_1754_2
R_NC10_66_22, NC10, Bacteria

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comp(350..1294)
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28MS1_JANSC
ABC transporter permease; K11071 spermidine/putrescine transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
binding-protein-dependent transport system inner membrane protein
13_1_20cm_2_scaffold_1754_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(1285..2442)
DNA (1158bp) protein (386aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales;
ATP-binding component of putrescine transport system n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYH7_THERP rbh
putrescine ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_1754_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2502..3254)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000382B872
Uncharacterized protein {ECO:0000313|EMBL:ETW99868.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
3-ketoacyl-ACP reductase
13_1_20cm_2_scaffold_1754_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3313..4122)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQA1_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF40949.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_2_scaffold_1754_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4210..5127
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PR48_9ACTO
LysR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative LysR, transcriptional regulator
13_1_20cm_2_scaffold_1754_7
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

5132..5794
DNA (663bp) protein (221aa)
ribonuclease H-like protein; K03469 ribonuclease HI [EC:3.1.26.4]
Predicted double-stranded RNA/RNA-DNA hybrid binding protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HYU4_9FIRM
Ribonuclease HI Tax=CG_CP02_01
13_1_20cm_2_scaffold_1754_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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5905..7308
DNA (1404bp) protein (468aa)
acetamidase n=1 Tax=Methyloversatilis universalis RepID=UPI00035D4539
AraC family transcriptional regulator Tax=CSP1_6_Rokubacteria
AraC family transcriptional regulator
13_1_20cm_2_scaffold_1754_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7339..8301)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030B0D48
transglutaminase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
transglutaminase domain-containing protein
13_1_20cm_2_scaffold_1754_10
CG_Mariprof_01, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8301..9254)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZPN1_9BACT
hypothetical protein Tax=CG_Mariprof_01
hypothetical protein
13_1_20cm_2_scaffold_1754_11
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(9288..10400)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y889_THIV6
hypothetical protein Tax=CG_Proteo_01
hypothetical protein
Displaying 11 items

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